Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
P04214 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
P04214 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
P04214 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
P04214 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.67□□□□□ -0.22
P04214 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
P04214 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.67□□□□□ -0.22
P04214 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Gm9550-201ENSMUST00000161130 862 ntBASIC13.67□□□□□ -0.22
P04214 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
P04214 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.67□□□□□ -0.22
P04214 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.67□□□□□ -0.22
P04214 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
P04214 Gm7467-201ENSMUST00000185173 652 ntBASIC13.67□□□□□ -0.22
P04214 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.67□□□□□ -0.22
P04214 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.67□□□□□ -0.22
P04214 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.67□□□□□ -0.22
P04214 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.67□□□□□ -0.22
P04214 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
P04214 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.67□□□□□ -0.22
P04214 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.67□□□□□ -0.22
P04214 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
P04214 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
P04214 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
P04214 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.66□□□□□ -0.22
P04214 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
P04214 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.66□□□□□ -0.22
P04214 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
P04214 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.66□□□□□ -0.22
P04214 Gm13611-201ENSMUST00000118269 318 ntBASIC13.66□□□□□ -0.22
P04214 Gm12266-201ENSMUST00000120311 962 ntBASIC13.66□□□□□ -0.22
P04214 Gm12291-201ENSMUST00000121627 311 ntBASIC13.66□□□□□ -0.22
P04214 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.66□□□□□ -0.22
P04214 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.66□□□□□ -0.22
P04214 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.66□□□□□ -0.22
P04214 Gm5070-201ENSMUST00000177599 862 ntBASIC13.66□□□□□ -0.22
P04214 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
P04214 Mir7221-201ENSMUST00000184009 72 ntBASIC13.66□□□□□ -0.22
P04214 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
P04214 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.66□□□□□ -0.22
P04214 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.66□□□□□ -0.22
P04214 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
P04214 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
P04214 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms