Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.92□□□□□ -0.34
ClppO88696 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.92□□□□□ -0.34
ClppO88696 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.92□□□□□ -0.34
ClppO88696 Gm8584-201ENSMUST00000171982 758 ntBASIC12.92□□□□□ -0.34
ClppO88696 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
ClppO88696 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.92□□□□□ -0.34
ClppO88696 Gm8652-201ENSMUST00000181363 964 ntBASIC12.92□□□□□ -0.34
ClppO88696 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.92□□□□□ -0.34
ClppO88696 Gm38144-201ENSMUST00000192790 465 ntBASIC12.92□□□□□ -0.34
ClppO88696 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.92□□□□□ -0.34
ClppO88696 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.92□□□□□ -0.34
ClppO88696 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
ClppO88696 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ClppO88696 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.92□□□□□ -0.34
ClppO88696 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ClppO88696 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ClppO88696 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.91□□□□□ -0.34
ClppO88696 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ClppO88696 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ClppO88696 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ClppO88696 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.91□□□□□ -0.34
ClppO88696 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.91□□□□□ -0.34
ClppO88696 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.91□□□□□ -0.34
ClppO88696 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.91□□□□□ -0.34
ClppO88696 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.91□□□□□ -0.34
ClppO88696 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.91□□□□□ -0.34
ClppO88696 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ClppO88696 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.91□□□□□ -0.34
ClppO88696 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ClppO88696 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.9□□□□□ -0.34
ClppO88696 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.9□□□□□ -0.34
ClppO88696 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
ClppO88696 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ClppO88696 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ClppO88696 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms