Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm24990-201ENSMUST00000157406 323 ntBASIC14.45□□□□□ -0.1
Trdmt1O55055 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.45□□□□□ -0.1
Trdmt1O55055 Gm38317-201ENSMUST00000195564 343 ntBASIC14.45□□□□□ -0.1
Trdmt1O55055 Gm38092-201ENSMUST00000195600 653 ntBASIC14.45□□□□□ -0.1
Trdmt1O55055 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.45□□□□□ -0.1
Trdmt1O55055 Gm44967-201ENSMUST00000207047 631 ntBASIC14.45□□□□□ -0.1
Trdmt1O55055 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.45□□□□□ -0.1
Trdmt1O55055 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Trdmt1O55055 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trdmt1O55055 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trdmt1O55055 Daam2-202ENSMUST00000224595 1926 ntBASIC14.45□□□□□ -0.1
Trdmt1O55055 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trdmt1O55055 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Gm13875-201ENSMUST00000120162 282 ntBASIC14.44□□□□□ -0.1
Trdmt1O55055 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.44□□□□□ -0.1
Trdmt1O55055 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.44□□□□□ -0.1
Trdmt1O55055 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.44□□□□□ -0.1
Trdmt1O55055 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.44□□□□□ -0.1
Trdmt1O55055 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.44□□□□□ -0.1
Trdmt1O55055 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.44□□□□□ -0.1
Trdmt1O55055 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trdmt1O55055 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trdmt1O55055 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trdmt1O55055 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trdmt1O55055 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trdmt1O55055 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Trdmt1O55055 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Gm13492-201ENSMUST00000119772 665 ntBASIC14.43□□□□□ -0.1
Trdmt1O55055 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.43□□□□□ -0.1
Trdmt1O55055 Gm15276-201ENSMUST00000145953 498 ntBASIC14.43□□□□□ -0.1
Trdmt1O55055 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.43□□□□□ -0.1
Trdmt1O55055 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Trdmt1O55055 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.43□□□□□ -0.1
Trdmt1O55055 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trdmt1O55055 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.43□□□□□ -0.1
Trdmt1O55055 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trdmt1O55055 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.43□□□□□ -0.1
Trdmt1O55055 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trdmt1O55055 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms