Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcf11G3X9Z4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcf11G3X9Z4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcf11G3X9Z4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcf11G3X9Z4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcf11G3X9Z4 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcf11G3X9Z4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcf11G3X9Z4 Gm30238-201ENSMUST00000195528 2603 ntBASIC19.62■□□□□ 0.73
Pcf11G3X9Z4 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcf11G3X9Z4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcf11G3X9Z4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Gm23119-201ENSMUST00000158610 140 ntBASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Gm19187-201ENSMUST00000206781 892 ntBASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 AC163667.3-201ENSMUST00000225774 222 ntBASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcf11G3X9Z4 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Gm8617-201ENSMUST00000118796 2222 ntBASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Gm6963-201ENSMUST00000147879 379 ntBASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcf11G3X9Z4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Gm5939-201ENSMUST00000119613 2874 ntBASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Gm43289-201ENSMUST00000200537 1475 ntBASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 B9d1os-201ENSMUST00000137010 674 ntBASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Mir5132-201ENSMUST00000175166 71 ntBASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Mir6979-201ENSMUST00000183927 56 ntBASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Gm28450-201ENSMUST00000187349 638 ntBASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Gm42937-201ENSMUST00000197360 752 ntBASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcf11G3X9Z4 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcf11G3X9Z4 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Pcf11G3X9Z4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcf11G3X9Z4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcf11G3X9Z4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms