Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Gm23363-201ENSMUST00000175024 79 ntBASIC13.74□□□□□ -0.21
Scn1aA2APX8 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.74□□□□□ -0.21
Scn1aA2APX8 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.74□□□□□ -0.21
Scn1aA2APX8 Olfr284-202ENSMUST00000206647 966 ntBASIC13.74□□□□□ -0.21
Scn1aA2APX8 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn1aA2APX8 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Gm45880-201ENSMUST00000213041 853 ntBASIC13.73□□□□□ -0.21
Scn1aA2APX8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Gm27501-201ENSMUST00000183599 107 ntBASIC13.73□□□□□ -0.21
Scn1aA2APX8 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.73□□□□□ -0.21
Scn1aA2APX8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Scn1aA2APX8 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Gm29396-201ENSMUST00000185659 716 ntBASIC13.72□□□□□ -0.21
Scn1aA2APX8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Scn1aA2APX8 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Scn1aA2APX8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 130.3 ms