Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm14630-201ENSMUST00000118057 246 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm14213-201ENSMUST00000119778 768 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm37458-201ENSMUST00000194055 410 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm45410-201ENSMUST00000211331 1093 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm38197-201ENSMUST00000192320 2122 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm15352-201ENSMUST00000118696 270 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm33707-201ENSMUST00000195135 569 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm6390-201ENSMUST00000215034 589 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm5178-201ENSMUST00000219380 898 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 AC154572.1-201ENSMUST00000226098 1204 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 AC165154.1-201ENSMUST00000226661 340 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gm5071-201ENSMUST00000104922 1035 ntBASIC6.74□□□□□ -1.33
Ubr4A2AN08 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gm24398-201ENSMUST00000157870 109 ntBASIC6.74□□□□□ -1.33
Ubr4A2AN08 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gm43912-201ENSMUST00000204352 538 ntBASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gm45085-201ENSMUST00000209100 441 ntBASIC6.74□□□□□ -1.33
Ubr4A2AN08 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC6.74□□□□□ -1.33
Ubr4A2AN08 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gm17827-201ENSMUST00000211825 742 ntBASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gm5525-201ENSMUST00000190438 1312 ntBASIC6.74□□□□□ -1.33
Ubr4A2AN08 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gm11295-201ENSMUST00000121379 803 ntBASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Gm6331-201ENSMUST00000217890 450 ntBASIC6.74□□□□□ -1.33
Ubr4A2AN08 AC130219.2-201ENSMUST00000228765 807 ntBASIC6.74□□□□□ -1.33
Ubr4A2AN08 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Ubr4A2AN08 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms