Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm27437-201ENSMUST00000183429 107 ntBASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm38144-201ENSMUST00000192790 465 ntBASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Gm38094-201ENSMUST00000195864 2978 ntBASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav9n-2A0A0G2JDP3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm12341-201ENSMUST00000119724 503 ntBASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm28631-201ENSMUST00000190740 334 ntBASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm43423-201ENSMUST00000198390 2094 ntBASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm5989-201ENSMUST00000096092 2077 ntBASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm37644-201ENSMUST00000192190 2270 ntBASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trav9n-2A0A0G2JDP3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms