Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb3S4R1G7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb3S4R1G7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb3S4R1G7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb3S4R1G7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.1■□□□□ 0.65
H2afb3S4R1G7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
H2afb3S4R1G7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
H2afb3S4R1G7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb3S4R1G7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb3S4R1G7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb3S4R1G7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb3S4R1G7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb3S4R1G7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb3S4R1G7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb3S4R1G7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb3S4R1G7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb3S4R1G7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
H2afb3S4R1G7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
H2afb3S4R1G7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.08■□□□□ 0.65
H2afb3S4R1G7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
H2afb3S4R1G7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
H2afb3S4R1G7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
H2afb3S4R1G7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
H2afb3S4R1G7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
H2afb3S4R1G7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H2afb3S4R1G7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H2afb3S4R1G7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
H2afb3S4R1G7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.07■□□□□ 0.64
H2afb3S4R1G7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
H2afb3S4R1G7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.07■□□□□ 0.64
H2afb3S4R1G7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
H2afb3S4R1G7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb3S4R1G7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb3S4R1G7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb3S4R1G7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb3S4R1G7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb3S4R1G7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb3S4R1G7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
H2afb3S4R1G7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb3S4R1G7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb3S4R1G7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
H2afb3S4R1G7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
H2afb3S4R1G7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.04■□□□□ 0.64
H2afb3S4R1G7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
H2afb3S4R1G7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.04■□□□□ 0.64
H2afb3S4R1G7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb3S4R1G7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb3S4R1G7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
H2afb3S4R1G7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb3S4R1G7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb3S4R1G7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb3S4R1G7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb3S4R1G7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb3S4R1G7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
H2afb3S4R1G7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
H2afb3S4R1G7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
H2afb3S4R1G7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb3S4R1G7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb3S4R1G7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
H2afb3S4R1G7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
H2afb3S4R1G7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
H2afb3S4R1G7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
H2afb3S4R1G7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
H2afb3S4R1G7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
H2afb3S4R1G7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
H2afb3S4R1G7 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.01■□□□□ 0.63
H2afb3S4R1G7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb3S4R1G7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
H2afb3S4R1G7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
H2afb3S4R1G7 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.01■□□□□ 0.63
H2afb3S4R1G7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.01■□□□□ 0.63
H2afb3S4R1G7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
H2afb3S4R1G7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
H2afb3S4R1G7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19■□□□□ 0.63
H2afb3S4R1G7 AC151971.4-201ENSMUST00000214717 704 ntBASIC19■□□□□ 0.63
H2afb3S4R1G7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
H2afb3S4R1G7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
H2afb3S4R1G7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
H2afb3S4R1G7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.99■□□□□ 0.63
H2afb3S4R1G7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
H2afb3S4R1G7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
H2afb3S4R1G7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
H2afb3S4R1G7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
H2afb3S4R1G7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb3S4R1G7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb3S4R1G7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
H2afb3S4R1G7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb3S4R1G7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb3S4R1G7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb3S4R1G7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb3S4R1G7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
H2afb3S4R1G7 Notumos-201ENSMUST00000151998 2659 ntBASIC18.97■□□□□ 0.63
H2afb3S4R1G7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.97■□□□□ 0.63
H2afb3S4R1G7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb3S4R1G7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb3S4R1G7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb3S4R1G7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb3S4R1G7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
H2afb3S4R1G7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb3S4R1G7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms