Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.48■■□□□ 1.19
Scn5aQ9JJV9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.48■■□□□ 1.19
Scn5aQ9JJV9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scn5aQ9JJV9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Scn5aQ9JJV9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22.47■■□□□ 1.19
Scn5aQ9JJV9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scn5aQ9JJV9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scn5aQ9JJV9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scn5aQ9JJV9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Scn5aQ9JJV9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Scn5aQ9JJV9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scn5aQ9JJV9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scn5aQ9JJV9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.46■■□□□ 1.19
Scn5aQ9JJV9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Scn5aQ9JJV9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Scn5aQ9JJV9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Scn5aQ9JJV9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Scn5aQ9JJV9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Scn5aQ9JJV9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Scn5aQ9JJV9 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.45■■□□□ 1.18
Scn5aQ9JJV9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.44■■□□□ 1.18
Scn5aQ9JJV9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Scn5aQ9JJV9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scn5aQ9JJV9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Scn5aQ9JJV9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Scn5aQ9JJV9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Scn5aQ9JJV9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.44■■□□□ 1.18
Scn5aQ9JJV9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Scn5aQ9JJV9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Scn5aQ9JJV9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scn5aQ9JJV9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Scn5aQ9JJV9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
Scn5aQ9JJV9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scn5aQ9JJV9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scn5aQ9JJV9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Scn5aQ9JJV9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Scn5aQ9JJV9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Scn5aQ9JJV9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Scn5aQ9JJV9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Scn5aQ9JJV9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.41■■□□□ 1.18
Scn5aQ9JJV9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Scn5aQ9JJV9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Scn5aQ9JJV9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Scn5aQ9JJV9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC22.4■■□□□ 1.18
Scn5aQ9JJV9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.4■■□□□ 1.18
Scn5aQ9JJV9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.4■■□□□ 1.18
Scn5aQ9JJV9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Scn5aQ9JJV9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Scn5aQ9JJV9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Scn5aQ9JJV9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.39■■□□□ 1.18
Scn5aQ9JJV9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.39■■□□□ 1.17
Scn5aQ9JJV9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Scn5aQ9JJV9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Scn5aQ9JJV9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Scn5aQ9JJV9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.37■■□□□ 1.17
Scn5aQ9JJV9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Scn5aQ9JJV9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scn5aQ9JJV9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.36■■□□□ 1.17
Scn5aQ9JJV9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Scn5aQ9JJV9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.36■■□□□ 1.17
Scn5aQ9JJV9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scn5aQ9JJV9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Scn5aQ9JJV9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scn5aQ9JJV9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scn5aQ9JJV9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scn5aQ9JJV9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scn5aQ9JJV9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scn5aQ9JJV9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Scn5aQ9JJV9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Scn5aQ9JJV9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Scn5aQ9JJV9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scn5aQ9JJV9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scn5aQ9JJV9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scn5aQ9JJV9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scn5aQ9JJV9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Scn5aQ9JJV9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scn5aQ9JJV9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Scn5aQ9JJV9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.33■■□□□ 1.17
Scn5aQ9JJV9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scn5aQ9JJV9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Scn5aQ9JJV9 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scn5aQ9JJV9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.33■■□□□ 1.16
Scn5aQ9JJV9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC22.33■■□□□ 1.16
Scn5aQ9JJV9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
Scn5aQ9JJV9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Scn5aQ9JJV9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC22.32■■□□□ 1.16
Scn5aQ9JJV9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Scn5aQ9JJV9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Scn5aQ9JJV9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
Scn5aQ9JJV9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.32■■□□□ 1.16
Scn5aQ9JJV9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Scn5aQ9JJV9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Scn5aQ9JJV9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Scn5aQ9JJV9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Scn5aQ9JJV9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Scn5aQ9JJV9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Scn5aQ9JJV9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scn5aQ9JJV9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC22.3■■□□□ 1.16
Scn5aQ9JJV9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scn5aQ9JJV9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms