Protein–RNA interactions for Protein: Q9DBF7

Cwc25, Pre-mRNA-splicing factor CWC25 homolog, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cwc25Q9DBF7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Cwc25Q9DBF7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC26.51■■□□□ 1.83
Cwc25Q9DBF7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cwc25Q9DBF7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cwc25Q9DBF7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Cwc25Q9DBF7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cwc25Q9DBF7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cwc25Q9DBF7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cwc25Q9DBF7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cwc25Q9DBF7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cwc25Q9DBF7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cwc25Q9DBF7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cwc25Q9DBF7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
Cwc25Q9DBF7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC26.48■■□□□ 1.83
Cwc25Q9DBF7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC26.47■■□□□ 1.83
Cwc25Q9DBF7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cwc25Q9DBF7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cwc25Q9DBF7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC26.47■■□□□ 1.83
Cwc25Q9DBF7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC26.47■■□□□ 1.83
Cwc25Q9DBF7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cwc25Q9DBF7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cwc25Q9DBF7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
Cwc25Q9DBF7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Cwc25Q9DBF7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Cwc25Q9DBF7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
Cwc25Q9DBF7 Gm10620-201ENSMUST00000098379 1332 ntBASIC26.45■■□□□ 1.83
Cwc25Q9DBF7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cwc25Q9DBF7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cwc25Q9DBF7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cwc25Q9DBF7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cwc25Q9DBF7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Cwc25Q9DBF7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC26.44■■□□□ 1.82
Cwc25Q9DBF7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Cwc25Q9DBF7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Cwc25Q9DBF7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cwc25Q9DBF7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cwc25Q9DBF7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cwc25Q9DBF7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Cwc25Q9DBF7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cwc25Q9DBF7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Cwc25Q9DBF7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Cwc25Q9DBF7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cwc25Q9DBF7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC26.42■■□□□ 1.82
Cwc25Q9DBF7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cwc25Q9DBF7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cwc25Q9DBF7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC26.41■■□□□ 1.82
Cwc25Q9DBF7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cwc25Q9DBF7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.41■■□□□ 1.82
Cwc25Q9DBF7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC26.41■■□□□ 1.82
Cwc25Q9DBF7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Cwc25Q9DBF7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cwc25Q9DBF7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cwc25Q9DBF7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cwc25Q9DBF7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Cwc25Q9DBF7 Gm15039-201ENSMUST00000118914 875 ntBASIC26.4■■□□□ 1.82
Cwc25Q9DBF7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Cwc25Q9DBF7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Cwc25Q9DBF7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cwc25Q9DBF7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cwc25Q9DBF7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cwc25Q9DBF7 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.39■■□□□ 1.82
Cwc25Q9DBF7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cwc25Q9DBF7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Cwc25Q9DBF7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Cwc25Q9DBF7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Cwc25Q9DBF7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Cwc25Q9DBF7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Cwc25Q9DBF7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cwc25Q9DBF7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Cwc25Q9DBF7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cwc25Q9DBF7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
Cwc25Q9DBF7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Cwc25Q9DBF7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
Cwc25Q9DBF7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cwc25Q9DBF7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cwc25Q9DBF7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Cwc25Q9DBF7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.37■■□□□ 1.81
Cwc25Q9DBF7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cwc25Q9DBF7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Cwc25Q9DBF7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC26.37■■□□□ 1.81
Cwc25Q9DBF7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cwc25Q9DBF7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC26.36■■□□□ 1.81
Cwc25Q9DBF7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cwc25Q9DBF7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Cwc25Q9DBF7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Cwc25Q9DBF7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
Cwc25Q9DBF7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cwc25Q9DBF7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC26.35■■□□□ 1.81
Cwc25Q9DBF7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cwc25Q9DBF7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cwc25Q9DBF7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cwc25Q9DBF7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cwc25Q9DBF7 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cwc25Q9DBF7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC26.33■■□□□ 1.81
Cwc25Q9DBF7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cwc25Q9DBF7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cwc25Q9DBF7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Cwc25Q9DBF7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.32■■□□□ 1.8
Cwc25Q9DBF7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC26.31■■□□□ 1.8
Cwc25Q9DBF7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms