Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.9■□□□□ 0.94
5530400C23RikQ9D3I0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
5530400C23RikQ9D3I0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
5530400C23RikQ9D3I0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
5530400C23RikQ9D3I0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
5530400C23RikQ9D3I0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.89■□□□□ 0.93
5530400C23RikQ9D3I0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
5530400C23RikQ9D3I0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
5530400C23RikQ9D3I0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
5530400C23RikQ9D3I0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.88■□□□□ 0.93
5530400C23RikQ9D3I0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
5530400C23RikQ9D3I0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
5530400C23RikQ9D3I0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
5530400C23RikQ9D3I0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
5530400C23RikQ9D3I0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
5530400C23RikQ9D3I0 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
5530400C23RikQ9D3I0 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.87■□□□□ 0.93
5530400C23RikQ9D3I0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.87■□□□□ 0.93
5530400C23RikQ9D3I0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
5530400C23RikQ9D3I0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
5530400C23RikQ9D3I0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
5530400C23RikQ9D3I0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
5530400C23RikQ9D3I0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.86■□□□□ 0.93
5530400C23RikQ9D3I0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
5530400C23RikQ9D3I0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
5530400C23RikQ9D3I0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
5530400C23RikQ9D3I0 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.86■□□□□ 0.93
5530400C23RikQ9D3I0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
5530400C23RikQ9D3I0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
5530400C23RikQ9D3I0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
5530400C23RikQ9D3I0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.85■□□□□ 0.93
5530400C23RikQ9D3I0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.85■□□□□ 0.93
5530400C23RikQ9D3I0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
5530400C23RikQ9D3I0 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.85■□□□□ 0.93
5530400C23RikQ9D3I0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
5530400C23RikQ9D3I0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
5530400C23RikQ9D3I0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
5530400C23RikQ9D3I0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.85■□□□□ 0.93
5530400C23RikQ9D3I0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
5530400C23RikQ9D3I0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
5530400C23RikQ9D3I0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
5530400C23RikQ9D3I0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.84■□□□□ 0.93
5530400C23RikQ9D3I0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
5530400C23RikQ9D3I0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
5530400C23RikQ9D3I0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.84■□□□□ 0.93
5530400C23RikQ9D3I0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
5530400C23RikQ9D3I0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
5530400C23RikQ9D3I0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
5530400C23RikQ9D3I0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
5530400C23RikQ9D3I0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
5530400C23RikQ9D3I0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
5530400C23RikQ9D3I0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
5530400C23RikQ9D3I0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
5530400C23RikQ9D3I0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
5530400C23RikQ9D3I0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
5530400C23RikQ9D3I0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
5530400C23RikQ9D3I0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
5530400C23RikQ9D3I0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
5530400C23RikQ9D3I0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
5530400C23RikQ9D3I0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
5530400C23RikQ9D3I0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
5530400C23RikQ9D3I0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
5530400C23RikQ9D3I0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
5530400C23RikQ9D3I0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
5530400C23RikQ9D3I0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
5530400C23RikQ9D3I0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.81■□□□□ 0.92
5530400C23RikQ9D3I0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
5530400C23RikQ9D3I0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
5530400C23RikQ9D3I0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
5530400C23RikQ9D3I0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
5530400C23RikQ9D3I0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.81■□□□□ 0.92
5530400C23RikQ9D3I0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
5530400C23RikQ9D3I0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
5530400C23RikQ9D3I0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
5530400C23RikQ9D3I0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
5530400C23RikQ9D3I0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
5530400C23RikQ9D3I0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
5530400C23RikQ9D3I0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
5530400C23RikQ9D3I0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.8■□□□□ 0.92
5530400C23RikQ9D3I0 Gm5921-201ENSMUST00000075898 882 ntBASIC20.8■□□□□ 0.92
5530400C23RikQ9D3I0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
5530400C23RikQ9D3I0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
5530400C23RikQ9D3I0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
5530400C23RikQ9D3I0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
5530400C23RikQ9D3I0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
5530400C23RikQ9D3I0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
5530400C23RikQ9D3I0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.79■□□□□ 0.92
5530400C23RikQ9D3I0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
5530400C23RikQ9D3I0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
5530400C23RikQ9D3I0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
5530400C23RikQ9D3I0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
5530400C23RikQ9D3I0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.78■□□□□ 0.92
5530400C23RikQ9D3I0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
5530400C23RikQ9D3I0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
5530400C23RikQ9D3I0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
5530400C23RikQ9D3I0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
5530400C23RikQ9D3I0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
5530400C23RikQ9D3I0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
5530400C23RikQ9D3I0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
5530400C23RikQ9D3I0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms