Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.2■□□□□ 0.66
Mrps28Q9CY16 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mrps28Q9CY16 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mrps28Q9CY16 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mrps28Q9CY16 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mrps28Q9CY16 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.2■□□□□ 0.66
Mrps28Q9CY16 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Mrps28Q9CY16 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mrps28Q9CY16 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mrps28Q9CY16 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Mrps28Q9CY16 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mrps28Q9CY16 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrps28Q9CY16 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mrps28Q9CY16 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.19■□□□□ 0.66
Mrps28Q9CY16 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.19■□□□□ 0.66
Mrps28Q9CY16 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.19■□□□□ 0.66
Mrps28Q9CY16 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.19■□□□□ 0.66
Mrps28Q9CY16 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mrps28Q9CY16 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mrps28Q9CY16 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mrps28Q9CY16 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Mrps28Q9CY16 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mrps28Q9CY16 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mrps28Q9CY16 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mrps28Q9CY16 Gm5921-201ENSMUST00000075898 882 ntBASIC19.18■□□□□ 0.66
Mrps28Q9CY16 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Mrps28Q9CY16 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mrps28Q9CY16 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mrps28Q9CY16 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mrps28Q9CY16 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mrps28Q9CY16 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mrps28Q9CY16 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.17■□□□□ 0.66
Mrps28Q9CY16 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Mrps28Q9CY16 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mrps28Q9CY16 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mrps28Q9CY16 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mrps28Q9CY16 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mrps28Q9CY16 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Mrps28Q9CY16 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mrps28Q9CY16 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mrps28Q9CY16 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mrps28Q9CY16 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Mrps28Q9CY16 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Mrps28Q9CY16 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mrps28Q9CY16 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mrps28Q9CY16 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mrps28Q9CY16 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Mrps28Q9CY16 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mrps28Q9CY16 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mrps28Q9CY16 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mrps28Q9CY16 Gm45444-201ENSMUST00000211394 898 ntBASIC19.15■□□□□ 0.66
Mrps28Q9CY16 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.15■□□□□ 0.66
Mrps28Q9CY16 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Mrps28Q9CY16 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.15■□□□□ 0.66
Mrps28Q9CY16 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Mrps28Q9CY16 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mrps28Q9CY16 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Mrps28Q9CY16 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.14■□□□□ 0.66
Mrps28Q9CY16 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.14■□□□□ 0.65
Mrps28Q9CY16 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Mrps28Q9CY16 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.14■□□□□ 0.65
Mrps28Q9CY16 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Mrps28Q9CY16 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mrps28Q9CY16 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Mrps28Q9CY16 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Mrps28Q9CY16 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.14■□□□□ 0.65
Mrps28Q9CY16 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mrps28Q9CY16 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mrps28Q9CY16 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Mrps28Q9CY16 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mrps28Q9CY16 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mrps28Q9CY16 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.13■□□□□ 0.65
Mrps28Q9CY16 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mrps28Q9CY16 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Mrps28Q9CY16 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Mrps28Q9CY16 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mrps28Q9CY16 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mrps28Q9CY16 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mrps28Q9CY16 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Mrps28Q9CY16 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mrps28Q9CY16 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Mrps28Q9CY16 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Mrps28Q9CY16 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mrps28Q9CY16 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mrps28Q9CY16 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Mrps28Q9CY16 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Mrps28Q9CY16 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Mrps28Q9CY16 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mrps28Q9CY16 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Mrps28Q9CY16 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mrps28Q9CY16 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mrps28Q9CY16 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.1■□□□□ 0.65
Mrps28Q9CY16 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mrps28Q9CY16 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mrps28Q9CY16 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Mrps28Q9CY16 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Mrps28Q9CY16 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Mrps28Q9CY16 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Mrps28Q9CY16 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Mrps28Q9CY16 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms