Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
Chd1lQ9CXF7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Chd1lQ9CXF7 Gm6821-201ENSMUST00000107540 542 ntBASIC24.07■■□□□ 1.44
Chd1lQ9CXF7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Chd1lQ9CXF7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Chd1lQ9CXF7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Chd1lQ9CXF7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Chd1lQ9CXF7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Chd1lQ9CXF7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Chd1lQ9CXF7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Chd1lQ9CXF7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Chd1lQ9CXF7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.06■■□□□ 1.44
Chd1lQ9CXF7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.06■■□□□ 1.44
Chd1lQ9CXF7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Chd1lQ9CXF7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Chd1lQ9CXF7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.05■■□□□ 1.44
Chd1lQ9CXF7 Gm45364-201ENSMUST00000210883 159 ntBASIC24.05■■□□□ 1.44
Chd1lQ9CXF7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Chd1lQ9CXF7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Chd1lQ9CXF7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Chd1lQ9CXF7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Chd1lQ9CXF7 Mir3960-201ENSMUST00000198213 73 ntBASIC24.04■■□□□ 1.44
Chd1lQ9CXF7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Chd1lQ9CXF7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Chd1lQ9CXF7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Chd1lQ9CXF7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Chd1lQ9CXF7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Chd1lQ9CXF7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Chd1lQ9CXF7 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC24.02■■□□□ 1.44
Chd1lQ9CXF7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Chd1lQ9CXF7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Chd1lQ9CXF7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Chd1lQ9CXF7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Chd1lQ9CXF7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
Chd1lQ9CXF7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Chd1lQ9CXF7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Chd1lQ9CXF7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC24.01■■□□□ 1.43
Chd1lQ9CXF7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Chd1lQ9CXF7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Chd1lQ9CXF7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Chd1lQ9CXF7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC24■■□□□ 1.43
Chd1lQ9CXF7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC24■■□□□ 1.43
Chd1lQ9CXF7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Chd1lQ9CXF7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC24■■□□□ 1.43
Chd1lQ9CXF7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Chd1lQ9CXF7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Chd1lQ9CXF7 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Chd1lQ9CXF7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Chd1lQ9CXF7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Chd1lQ9CXF7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Chd1lQ9CXF7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Chd1lQ9CXF7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Chd1lQ9CXF7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Chd1lQ9CXF7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.97■■□□□ 1.43
Chd1lQ9CXF7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Chd1lQ9CXF7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Chd1lQ9CXF7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chd1lQ9CXF7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chd1lQ9CXF7 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.96■■□□□ 1.43
Chd1lQ9CXF7 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.96■■□□□ 1.43
Chd1lQ9CXF7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Chd1lQ9CXF7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chd1lQ9CXF7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Chd1lQ9CXF7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Chd1lQ9CXF7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC23.96■■□□□ 1.43
Chd1lQ9CXF7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Chd1lQ9CXF7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Chd1lQ9CXF7 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.95■■□□□ 1.42
Chd1lQ9CXF7 Gm43403-201ENSMUST00000198011 1786 ntBASIC23.95■■□□□ 1.42
Chd1lQ9CXF7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
Chd1lQ9CXF7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Chd1lQ9CXF7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Chd1lQ9CXF7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chd1lQ9CXF7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Chd1lQ9CXF7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chd1lQ9CXF7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chd1lQ9CXF7 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chd1lQ9CXF7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chd1lQ9CXF7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Chd1lQ9CXF7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chd1lQ9CXF7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Chd1lQ9CXF7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Chd1lQ9CXF7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Chd1lQ9CXF7 Gm4430-201ENSMUST00000192413 1943 ntBASIC23.93■■□□□ 1.42
Chd1lQ9CXF7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Chd1lQ9CXF7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Chd1lQ9CXF7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Chd1lQ9CXF7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Chd1lQ9CXF7 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Chd1lQ9CXF7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Chd1lQ9CXF7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Chd1lQ9CXF7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chd1lQ9CXF7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Chd1lQ9CXF7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chd1lQ9CXF7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chd1lQ9CXF7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chd1lQ9CXF7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Chd1lQ9CXF7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Chd1lQ9CXF7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Chd1lQ9CXF7 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms