Protein–RNA interactions for Protein: Q9CTG6

Atp13a2, Cation-transporting ATPase 13A2, mousemouse

Predictions only

Length 1,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a2Q9CTG6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp13a2Q9CTG6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Atp13a2Q9CTG6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Atp13a2Q9CTG6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp13a2Q9CTG6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Atp13a2Q9CTG6 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.61■□□□□ 0.89
Atp13a2Q9CTG6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp13a2Q9CTG6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.61■□□□□ 0.89
Atp13a2Q9CTG6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp13a2Q9CTG6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.61■□□□□ 0.89
Atp13a2Q9CTG6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp13a2Q9CTG6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp13a2Q9CTG6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp13a2Q9CTG6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
Atp13a2Q9CTG6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Atp13a2Q9CTG6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp13a2Q9CTG6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp13a2Q9CTG6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp13a2Q9CTG6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp13a2Q9CTG6 Notumos-201ENSMUST00000151998 2659 ntBASIC20.6■□□□□ 0.89
Atp13a2Q9CTG6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp13a2Q9CTG6 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Atp13a2Q9CTG6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp13a2Q9CTG6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp13a2Q9CTG6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp13a2Q9CTG6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp13a2Q9CTG6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Atp13a2Q9CTG6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Atp13a2Q9CTG6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Atp13a2Q9CTG6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Atp13a2Q9CTG6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Atp13a2Q9CTG6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.57■□□□□ 0.88
Atp13a2Q9CTG6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp13a2Q9CTG6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp13a2Q9CTG6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Atp13a2Q9CTG6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Atp13a2Q9CTG6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Atp13a2Q9CTG6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Atp13a2Q9CTG6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.56■□□□□ 0.88
Atp13a2Q9CTG6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.56■□□□□ 0.88
Atp13a2Q9CTG6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp13a2Q9CTG6 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.56■□□□□ 0.88
Atp13a2Q9CTG6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp13a2Q9CTG6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp13a2Q9CTG6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Atp13a2Q9CTG6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Atp13a2Q9CTG6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp13a2Q9CTG6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
Atp13a2Q9CTG6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Atp13a2Q9CTG6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
Atp13a2Q9CTG6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp13a2Q9CTG6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Atp13a2Q9CTG6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a2Q9CTG6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Atp13a2Q9CTG6 Gm5812-201ENSMUST00000061073 957 ntBASIC20.54■□□□□ 0.88
Atp13a2Q9CTG6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a2Q9CTG6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a2Q9CTG6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a2Q9CTG6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atp13a2Q9CTG6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Atp13a2Q9CTG6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp13a2Q9CTG6 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.53■□□□□ 0.88
Atp13a2Q9CTG6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp13a2Q9CTG6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp13a2Q9CTG6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp13a2Q9CTG6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Atp13a2Q9CTG6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp13a2Q9CTG6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a2Q9CTG6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.52■□□□□ 0.88
Atp13a2Q9CTG6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.52■□□□□ 0.88
Atp13a2Q9CTG6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp13a2Q9CTG6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Atp13a2Q9CTG6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.52■□□□□ 0.87
Atp13a2Q9CTG6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a2Q9CTG6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Atp13a2Q9CTG6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a2Q9CTG6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Atp13a2Q9CTG6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Atp13a2Q9CTG6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a2Q9CTG6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp13a2Q9CTG6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a2Q9CTG6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.5■□□□□ 0.87
Atp13a2Q9CTG6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a2Q9CTG6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a2Q9CTG6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a2Q9CTG6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Atp13a2Q9CTG6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Atp13a2Q9CTG6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Atp13a2Q9CTG6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp13a2Q9CTG6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp13a2Q9CTG6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp13a2Q9CTG6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp13a2Q9CTG6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.49■□□□□ 0.87
Atp13a2Q9CTG6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp13a2Q9CTG6 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.48■□□□□ 0.87
Atp13a2Q9CTG6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp13a2Q9CTG6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp13a2Q9CTG6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp13a2Q9CTG6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Atp13a2Q9CTG6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms