Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb3Q91XZ7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb3Q91XZ7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.1■□□□□ 0.97
Pcdhb3Q91XZ7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb3Q91XZ7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb3Q91XZ7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb3Q91XZ7 Cap2-205ENSMUST00000225824 1634 ntBASIC21.1■□□□□ 0.97
Pcdhb3Q91XZ7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb3Q91XZ7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Pcdhb3Q91XZ7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb3Q91XZ7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb3Q91XZ7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb3Q91XZ7 Scarna2-201ENSMUST00000157560 414 ntBASIC21.08■□□□□ 0.97
Pcdhb3Q91XZ7 Gm45364-201ENSMUST00000210883 159 ntBASIC21.08■□□□□ 0.97
Pcdhb3Q91XZ7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb3Q91XZ7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb3Q91XZ7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb3Q91XZ7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhb3Q91XZ7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
Pcdhb3Q91XZ7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb3Q91XZ7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb3Q91XZ7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.07■□□□□ 0.96
Pcdhb3Q91XZ7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb3Q91XZ7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.07■□□□□ 0.96
Pcdhb3Q91XZ7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.07■□□□□ 0.96
Pcdhb3Q91XZ7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb3Q91XZ7 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.06■□□□□ 0.96
Pcdhb3Q91XZ7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb3Q91XZ7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhb3Q91XZ7 Gm9806-201ENSMUST00000051080 552 ntBASIC21.06■□□□□ 0.96
Pcdhb3Q91XZ7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhb3Q91XZ7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
Pcdhb3Q91XZ7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb3Q91XZ7 Gm11687-201ENSMUST00000118911 886 ntBASIC21.04■□□□□ 0.96
Pcdhb3Q91XZ7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb3Q91XZ7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb3Q91XZ7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb3Q91XZ7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb3Q91XZ7 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb3Q91XZ7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb3Q91XZ7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pcdhb3Q91XZ7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb3Q91XZ7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb3Q91XZ7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb3Q91XZ7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Pcdhb3Q91XZ7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Pcdhb3Q91XZ7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.02■□□□□ 0.96
Pcdhb3Q91XZ7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb3Q91XZ7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb3Q91XZ7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb3Q91XZ7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb3Q91XZ7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb3Q91XZ7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.01■□□□□ 0.95
Pcdhb3Q91XZ7 Gm9812-201ENSMUST00000061934 968 ntBASIC21.01■□□□□ 0.95
Pcdhb3Q91XZ7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb3Q91XZ7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb3Q91XZ7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb3Q91XZ7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb3Q91XZ7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb3Q91XZ7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb3Q91XZ7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21■□□□□ 0.95
Pcdhb3Q91XZ7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Pcdhb3Q91XZ7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb3Q91XZ7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb3Q91XZ7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb3Q91XZ7 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb3Q91XZ7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.99■□□□□ 0.95
Pcdhb3Q91XZ7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb3Q91XZ7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb3Q91XZ7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb3Q91XZ7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb3Q91XZ7 Gm16437-201ENSMUST00000025669 507 ntBASIC20.98■□□□□ 0.95
Pcdhb3Q91XZ7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb3Q91XZ7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb3Q91XZ7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb3Q91XZ7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb3Q91XZ7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb3Q91XZ7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb3Q91XZ7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb3Q91XZ7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb3Q91XZ7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb3Q91XZ7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb3Q91XZ7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb3Q91XZ7 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.96■□□□□ 0.95
Pcdhb3Q91XZ7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb3Q91XZ7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb3Q91XZ7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhb3Q91XZ7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb3Q91XZ7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.95■□□□□ 0.94
Pcdhb3Q91XZ7 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.95■□□□□ 0.94
Pcdhb3Q91XZ7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb3Q91XZ7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb3Q91XZ7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb3Q91XZ7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb3Q91XZ7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb3Q91XZ7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.94■□□□□ 0.94
Pcdhb3Q91XZ7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb3Q91XZ7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb3Q91XZ7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhb3Q91XZ7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 125.4 ms