Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb8Q91XZ2 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb8Q91XZ2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.79■□□□□ 0.92
Pcdhb8Q91XZ2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb8Q91XZ2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb8Q91XZ2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb8Q91XZ2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcdhb8Q91XZ2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb8Q91XZ2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb8Q91XZ2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb8Q91XZ2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb8Q91XZ2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdhb8Q91XZ2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb8Q91XZ2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb8Q91XZ2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhb8Q91XZ2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb8Q91XZ2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb8Q91XZ2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb8Q91XZ2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.77■□□□□ 0.92
Pcdhb8Q91XZ2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.77■□□□□ 0.92
Pcdhb8Q91XZ2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb8Q91XZ2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb8Q91XZ2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb8Q91XZ2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhb8Q91XZ2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhb8Q91XZ2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Pcdhb8Q91XZ2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdhb8Q91XZ2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb8Q91XZ2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.76■□□□□ 0.91
Pcdhb8Q91XZ2 Gm10420-201ENSMUST00000121713 882 ntBASIC20.76■□□□□ 0.91
Pcdhb8Q91XZ2 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.76■□□□□ 0.91
Pcdhb8Q91XZ2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb8Q91XZ2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.75■□□□□ 0.91
Pcdhb8Q91XZ2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb8Q91XZ2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb8Q91XZ2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Pcdhb8Q91XZ2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.74■□□□□ 0.91
Pcdhb8Q91XZ2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb8Q91XZ2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb8Q91XZ2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb8Q91XZ2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb8Q91XZ2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb8Q91XZ2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhb8Q91XZ2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb8Q91XZ2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb8Q91XZ2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Pcdhb8Q91XZ2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb8Q91XZ2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pcdhb8Q91XZ2 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb8Q91XZ2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb8Q91XZ2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.72■□□□□ 0.91
Pcdhb8Q91XZ2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Pcdhb8Q91XZ2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb8Q91XZ2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.72■□□□□ 0.91
Pcdhb8Q91XZ2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb8Q91XZ2 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.72■□□□□ 0.91
Pcdhb8Q91XZ2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb8Q91XZ2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb8Q91XZ2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb8Q91XZ2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb8Q91XZ2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Pcdhb8Q91XZ2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb8Q91XZ2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Pcdhb8Q91XZ2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Pcdhb8Q91XZ2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.71■□□□□ 0.91
Pcdhb8Q91XZ2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb8Q91XZ2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.71■□□□□ 0.91
Pcdhb8Q91XZ2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb8Q91XZ2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb8Q91XZ2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdhb8Q91XZ2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb8Q91XZ2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdhb8Q91XZ2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb8Q91XZ2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pcdhb8Q91XZ2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb8Q91XZ2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.7■□□□□ 0.9
Pcdhb8Q91XZ2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdhb8Q91XZ2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb8Q91XZ2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb8Q91XZ2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb8Q91XZ2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb8Q91XZ2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb8Q91XZ2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb8Q91XZ2 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.68■□□□□ 0.9
Pcdhb8Q91XZ2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb8Q91XZ2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb8Q91XZ2 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.68■□□□□ 0.9
Pcdhb8Q91XZ2 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.68■□□□□ 0.9
Pcdhb8Q91XZ2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhb8Q91XZ2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb8Q91XZ2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhb8Q91XZ2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb8Q91XZ2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb8Q91XZ2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb8Q91XZ2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhb8Q91XZ2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdhb8Q91XZ2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhb8Q91XZ2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb8Q91XZ2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb8Q91XZ2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 135.9 ms