Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga9Q91XX9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Pcdhga9Q91XX9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga9Q91XX9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga9Q91XX9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.07■□□□□ 0.96
Pcdhga9Q91XX9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhga9Q91XX9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcdhga9Q91XX9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdhga9Q91XX9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga9Q91XX9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga9Q91XX9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga9Q91XX9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Pcdhga9Q91XX9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga9Q91XX9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdhga9Q91XX9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhga9Q91XX9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.05■□□□□ 0.96
Pcdhga9Q91XX9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhga9Q91XX9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Pcdhga9Q91XX9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.05■□□□□ 0.96
Pcdhga9Q91XX9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhga9Q91XX9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Pcdhga9Q91XX9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.05■□□□□ 0.96
Pcdhga9Q91XX9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga9Q91XX9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pcdhga9Q91XX9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdhga9Q91XX9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga9Q91XX9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.04■□□□□ 0.96
Pcdhga9Q91XX9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga9Q91XX9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga9Q91XX9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga9Q91XX9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Pcdhga9Q91XX9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.03■□□□□ 0.96
Pcdhga9Q91XX9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga9Q91XX9 Rps24-207ENSMUST00000224568 714 ntBASIC21.03■□□□□ 0.96
Pcdhga9Q91XX9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Pcdhga9Q91XX9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga9Q91XX9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga9Q91XX9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga9Q91XX9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pcdhga9Q91XX9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga9Q91XX9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga9Q91XX9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.02■□□□□ 0.96
Pcdhga9Q91XX9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga9Q91XX9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga9Q91XX9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga9Q91XX9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga9Q91XX9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga9Q91XX9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Pcdhga9Q91XX9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga9Q91XX9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga9Q91XX9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga9Q91XX9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga9Q91XX9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga9Q91XX9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga9Q91XX9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Pcdhga9Q91XX9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga9Q91XX9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga9Q91XX9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga9Q91XX9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga9Q91XX9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga9Q91XX9 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21■□□□□ 0.95
Pcdhga9Q91XX9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga9Q91XX9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21■□□□□ 0.95
Pcdhga9Q91XX9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Pcdhga9Q91XX9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhga9Q91XX9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhga9Q91XX9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Pcdhga9Q91XX9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdhga9Q91XX9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga9Q91XX9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga9Q91XX9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga9Q91XX9 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.98■□□□□ 0.95
Pcdhga9Q91XX9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga9Q91XX9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga9Q91XX9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga9Q91XX9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga9Q91XX9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga9Q91XX9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga9Q91XX9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga9Q91XX9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhga9Q91XX9 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.97■□□□□ 0.95
Pcdhga9Q91XX9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga9Q91XX9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pcdhga9Q91XX9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga9Q91XX9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga9Q91XX9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhga9Q91XX9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhga9Q91XX9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhga9Q91XX9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Pcdhga9Q91XX9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhga9Q91XX9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhga9Q91XX9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhga9Q91XX9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhga9Q91XX9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.95■□□□□ 0.94
Pcdhga9Q91XX9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhga9Q91XX9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhga9Q91XX9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga9Q91XX9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhga9Q91XX9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga9Q91XX9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms