Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh18Q8VHR0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh18Q8VHR0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcdh18Q8VHR0 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.36■□□□□ 0.85
Pcdh18Q8VHR0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh18Q8VHR0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh18Q8VHR0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh18Q8VHR0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh18Q8VHR0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.36■□□□□ 0.85
Pcdh18Q8VHR0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.35■□□□□ 0.85
Pcdh18Q8VHR0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh18Q8VHR0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdh18Q8VHR0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Pcdh18Q8VHR0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.34■□□□□ 0.85
Pcdh18Q8VHR0 Gm6311-201ENSMUST00000073790 878 ntBASIC20.34■□□□□ 0.85
Pcdh18Q8VHR0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh18Q8VHR0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh18Q8VHR0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdh18Q8VHR0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Pcdh18Q8VHR0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.33■□□□□ 0.85
Pcdh18Q8VHR0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh18Q8VHR0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh18Q8VHR0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh18Q8VHR0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh18Q8VHR0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh18Q8VHR0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.33■□□□□ 0.85
Pcdh18Q8VHR0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pcdh18Q8VHR0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh18Q8VHR0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh18Q8VHR0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh18Q8VHR0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
Pcdh18Q8VHR0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdh18Q8VHR0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh18Q8VHR0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Pcdh18Q8VHR0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh18Q8VHR0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh18Q8VHR0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.32■□□□□ 0.84
Pcdh18Q8VHR0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh18Q8VHR0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh18Q8VHR0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh18Q8VHR0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh18Q8VHR0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh18Q8VHR0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh18Q8VHR0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh18Q8VHR0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh18Q8VHR0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh18Q8VHR0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdh18Q8VHR0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh18Q8VHR0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pcdh18Q8VHR0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh18Q8VHR0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh18Q8VHR0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.3■□□□□ 0.84
Pcdh18Q8VHR0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.3■□□□□ 0.84
Pcdh18Q8VHR0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh18Q8VHR0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pcdh18Q8VHR0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh18Q8VHR0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh18Q8VHR0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh18Q8VHR0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh18Q8VHR0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdh18Q8VHR0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh18Q8VHR0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh18Q8VHR0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh18Q8VHR0 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.29■□□□□ 0.84
Pcdh18Q8VHR0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh18Q8VHR0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh18Q8VHR0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh18Q8VHR0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh18Q8VHR0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh18Q8VHR0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdh18Q8VHR0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh18Q8VHR0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Pcdh18Q8VHR0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh18Q8VHR0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh18Q8VHR0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdh18Q8VHR0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdh18Q8VHR0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh18Q8VHR0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh18Q8VHR0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdh18Q8VHR0 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.26■□□□□ 0.83
Pcdh18Q8VHR0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh18Q8VHR0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh18Q8VHR0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Pcdh18Q8VHR0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh18Q8VHR0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh18Q8VHR0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdh18Q8VHR0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdh18Q8VHR0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdh18Q8VHR0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Pcdh18Q8VHR0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh18Q8VHR0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdh18Q8VHR0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdh18Q8VHR0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.25■□□□□ 0.83
Pcdh18Q8VHR0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh18Q8VHR0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh18Q8VHR0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdh18Q8VHR0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh18Q8VHR0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh18Q8VHR0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh18Q8VHR0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms