Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ndc1Q8VCB1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc1Q8VCB1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc1Q8VCB1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.05■□□□□ 0.8
Ndc1Q8VCB1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc1Q8VCB1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc1Q8VCB1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc1Q8VCB1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ndc1Q8VCB1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.05■□□□□ 0.8
Ndc1Q8VCB1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ndc1Q8VCB1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc1Q8VCB1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc1Q8VCB1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc1Q8VCB1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc1Q8VCB1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc1Q8VCB1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.04■□□□□ 0.8
Ndc1Q8VCB1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.04■□□□□ 0.8
Ndc1Q8VCB1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc1Q8VCB1 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.04■□□□□ 0.8
Ndc1Q8VCB1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc1Q8VCB1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc1Q8VCB1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc1Q8VCB1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc1Q8VCB1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ndc1Q8VCB1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ndc1Q8VCB1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ndc1Q8VCB1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ndc1Q8VCB1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ndc1Q8VCB1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.03■□□□□ 0.8
Ndc1Q8VCB1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ndc1Q8VCB1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ndc1Q8VCB1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ndc1Q8VCB1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ndc1Q8VCB1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ndc1Q8VCB1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ndc1Q8VCB1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ndc1Q8VCB1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ndc1Q8VCB1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.03■□□□□ 0.8
Ndc1Q8VCB1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ndc1Q8VCB1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ndc1Q8VCB1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ndc1Q8VCB1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ndc1Q8VCB1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ndc1Q8VCB1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ndc1Q8VCB1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ndc1Q8VCB1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ndc1Q8VCB1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ndc1Q8VCB1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Ndc1Q8VCB1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ndc1Q8VCB1 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.01■□□□□ 0.79
Ndc1Q8VCB1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.01■□□□□ 0.79
Ndc1Q8VCB1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Ndc1Q8VCB1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ndc1Q8VCB1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ndc1Q8VCB1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ndc1Q8VCB1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ndc1Q8VCB1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20■□□□□ 0.79
Ndc1Q8VCB1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20■□□□□ 0.79
Ndc1Q8VCB1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ndc1Q8VCB1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Ndc1Q8VCB1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ndc1Q8VCB1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ndc1Q8VCB1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.99■□□□□ 0.79
Ndc1Q8VCB1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.99■□□□□ 0.79
Ndc1Q8VCB1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ndc1Q8VCB1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.99■□□□□ 0.79
Ndc1Q8VCB1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ndc1Q8VCB1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndc1Q8VCB1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndc1Q8VCB1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndc1Q8VCB1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndc1Q8VCB1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndc1Q8VCB1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndc1Q8VCB1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndc1Q8VCB1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndc1Q8VCB1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ndc1Q8VCB1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ndc1Q8VCB1 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.97■□□□□ 0.79
Ndc1Q8VCB1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.97■□□□□ 0.79
Ndc1Q8VCB1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.97■□□□□ 0.79
Ndc1Q8VCB1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Ndc1Q8VCB1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Ndc1Q8VCB1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ndc1Q8VCB1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ndc1Q8VCB1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ndc1Q8VCB1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ndc1Q8VCB1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ndc1Q8VCB1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ndc1Q8VCB1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ndc1Q8VCB1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ndc1Q8VCB1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ndc1Q8VCB1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ndc1Q8VCB1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Ndc1Q8VCB1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ndc1Q8VCB1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ndc1Q8VCB1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ndc1Q8VCB1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.95■□□□□ 0.78
Ndc1Q8VCB1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ndc1Q8VCB1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ndc1Q8VCB1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms