Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Gm7332-201ENSMUST00000118351 454 ntBASIC20.9■□□□□ 0.94
Slc47a1Q8K0H1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Slc47a1Q8K0H1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Slc47a1Q8K0H1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Slc47a1Q8K0H1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Slc47a1Q8K0H1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Slc47a1Q8K0H1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Slc47a1Q8K0H1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Slc47a1Q8K0H1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc47a1Q8K0H1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.89■□□□□ 0.93
Slc47a1Q8K0H1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc47a1Q8K0H1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc47a1Q8K0H1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc47a1Q8K0H1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc47a1Q8K0H1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc47a1Q8K0H1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc47a1Q8K0H1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Slc47a1Q8K0H1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.88■□□□□ 0.93
Slc47a1Q8K0H1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc47a1Q8K0H1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc47a1Q8K0H1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc47a1Q8K0H1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc47a1Q8K0H1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc47a1Q8K0H1 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc47a1Q8K0H1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc47a1Q8K0H1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc47a1Q8K0H1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc47a1Q8K0H1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc47a1Q8K0H1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Slc47a1Q8K0H1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Slc47a1Q8K0H1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Slc47a1Q8K0H1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc47a1Q8K0H1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Slc47a1Q8K0H1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc47a1Q8K0H1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.86■□□□□ 0.93
Slc47a1Q8K0H1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc47a1Q8K0H1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.85■□□□□ 0.93
Slc47a1Q8K0H1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.85■□□□□ 0.93
Slc47a1Q8K0H1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.85■□□□□ 0.93
Slc47a1Q8K0H1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.85■□□□□ 0.93
Slc47a1Q8K0H1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc47a1Q8K0H1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc47a1Q8K0H1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc47a1Q8K0H1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slc47a1Q8K0H1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Slc47a1Q8K0H1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc47a1Q8K0H1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc47a1Q8K0H1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc47a1Q8K0H1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc47a1Q8K0H1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.84■□□□□ 0.93
Slc47a1Q8K0H1 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc47a1Q8K0H1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Slc47a1Q8K0H1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.83■□□□□ 0.93
Slc47a1Q8K0H1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc47a1Q8K0H1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc47a1Q8K0H1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Slc47a1Q8K0H1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc47a1Q8K0H1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc47a1Q8K0H1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc47a1Q8K0H1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc47a1Q8K0H1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc47a1Q8K0H1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Slc47a1Q8K0H1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc47a1Q8K0H1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Slc47a1Q8K0H1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Slc47a1Q8K0H1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc47a1Q8K0H1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc47a1Q8K0H1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc47a1Q8K0H1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc47a1Q8K0H1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc47a1Q8K0H1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Slc47a1Q8K0H1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Slc47a1Q8K0H1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc47a1Q8K0H1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc47a1Q8K0H1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc47a1Q8K0H1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Slc47a1Q8K0H1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
Slc47a1Q8K0H1 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.8■□□□□ 0.92
Slc47a1Q8K0H1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc47a1Q8K0H1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc47a1Q8K0H1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.79■□□□□ 0.92
Slc47a1Q8K0H1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Slc47a1Q8K0H1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc47a1Q8K0H1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc47a1Q8K0H1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc47a1Q8K0H1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Slc47a1Q8K0H1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc47a1Q8K0H1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Slc47a1Q8K0H1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc47a1Q8K0H1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Slc47a1Q8K0H1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc47a1Q8K0H1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Slc47a1Q8K0H1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Slc47a1Q8K0H1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Slc47a1Q8K0H1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.77■□□□□ 0.92
Slc47a1Q8K0H1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc47a1Q8K0H1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc47a1Q8K0H1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc47a1Q8K0H1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Slc47a1Q8K0H1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms