Protein–RNA interactions for Protein: Q8CGF5

Tmem56, Transmembrane protein 56, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem56Q8CGF5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmem56Q8CGF5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.27■□□□□ 0.52
Tmem56Q8CGF5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmem56Q8CGF5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.27■□□□□ 0.52
Tmem56Q8CGF5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Tmem56Q8CGF5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Tmem56Q8CGF5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmem56Q8CGF5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.26■□□□□ 0.51
Tmem56Q8CGF5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Tmem56Q8CGF5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tmem56Q8CGF5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmem56Q8CGF5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmem56Q8CGF5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmem56Q8CGF5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmem56Q8CGF5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.25■□□□□ 0.51
Tmem56Q8CGF5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmem56Q8CGF5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmem56Q8CGF5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.25■□□□□ 0.51
Tmem56Q8CGF5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Tmem56Q8CGF5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.25■□□□□ 0.51
Tmem56Q8CGF5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Tmem56Q8CGF5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Tmem56Q8CGF5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmem56Q8CGF5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Tmem56Q8CGF5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem56Q8CGF5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem56Q8CGF5 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem56Q8CGF5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem56Q8CGF5 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.24■□□□□ 0.51
Tmem56Q8CGF5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tmem56Q8CGF5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Tmem56Q8CGF5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tmem56Q8CGF5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem56Q8CGF5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem56Q8CGF5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.23■□□□□ 0.51
Tmem56Q8CGF5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem56Q8CGF5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem56Q8CGF5 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tmem56Q8CGF5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Tmem56Q8CGF5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem56Q8CGF5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Tmem56Q8CGF5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem56Q8CGF5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem56Q8CGF5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Tmem56Q8CGF5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem56Q8CGF5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.22■□□□□ 0.51
Tmem56Q8CGF5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem56Q8CGF5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tmem56Q8CGF5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem56Q8CGF5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Tmem56Q8CGF5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem56Q8CGF5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem56Q8CGF5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Tmem56Q8CGF5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem56Q8CGF5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem56Q8CGF5 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.21■□□□□ 0.51
Tmem56Q8CGF5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmem56Q8CGF5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem56Q8CGF5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem56Q8CGF5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.2■□□□□ 0.5
Tmem56Q8CGF5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem56Q8CGF5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem56Q8CGF5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tmem56Q8CGF5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Tmem56Q8CGF5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem56Q8CGF5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Tmem56Q8CGF5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem56Q8CGF5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem56Q8CGF5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tmem56Q8CGF5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmem56Q8CGF5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.18■□□□□ 0.5
Tmem56Q8CGF5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmem56Q8CGF5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmem56Q8CGF5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmem56Q8CGF5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmem56Q8CGF5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tmem56Q8CGF5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmem56Q8CGF5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.18■□□□□ 0.5
Tmem56Q8CGF5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.18■□□□□ 0.5
Tmem56Q8CGF5 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.18■□□□□ 0.5
Tmem56Q8CGF5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmem56Q8CGF5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmem56Q8CGF5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmem56Q8CGF5 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmem56Q8CGF5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.17■□□□□ 0.5
Tmem56Q8CGF5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Tmem56Q8CGF5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tmem56Q8CGF5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmem56Q8CGF5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Tmem56Q8CGF5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmem56Q8CGF5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmem56Q8CGF5 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tmem56Q8CGF5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tmem56Q8CGF5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tmem56Q8CGF5 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmem56Q8CGF5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tmem56Q8CGF5 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tmem56Q8CGF5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.16■□□□□ 0.5
Tmem56Q8CGF5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tmem56Q8CGF5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms