Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.86■□□□□ 0.93
Rab43Q8CG50 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab43Q8CG50 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab43Q8CG50 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rab43Q8CG50 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.85■□□□□ 0.93
Rab43Q8CG50 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rab43Q8CG50 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rab43Q8CG50 Gm21956-201ENSMUST00000179946 522 ntBASIC20.85■□□□□ 0.93
Rab43Q8CG50 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Rab43Q8CG50 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rab43Q8CG50 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab43Q8CG50 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab43Q8CG50 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rab43Q8CG50 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rab43Q8CG50 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab43Q8CG50 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab43Q8CG50 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rab43Q8CG50 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rab43Q8CG50 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab43Q8CG50 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rab43Q8CG50 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Rab43Q8CG50 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rab43Q8CG50 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.83■□□□□ 0.93
Rab43Q8CG50 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rab43Q8CG50 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rab43Q8CG50 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab43Q8CG50 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
Rab43Q8CG50 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rab43Q8CG50 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.82■□□□□ 0.92
Rab43Q8CG50 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab43Q8CG50 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab43Q8CG50 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.81■□□□□ 0.92
Rab43Q8CG50 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab43Q8CG50 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rab43Q8CG50 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab43Q8CG50 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rab43Q8CG50 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rab43Q8CG50 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.81■□□□□ 0.92
Rab43Q8CG50 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rab43Q8CG50 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.81■□□□□ 0.92
Rab43Q8CG50 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.81■□□□□ 0.92
Rab43Q8CG50 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.81■□□□□ 0.92
Rab43Q8CG50 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Rab43Q8CG50 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab43Q8CG50 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Rab43Q8CG50 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.8■□□□□ 0.92
Rab43Q8CG50 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab43Q8CG50 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rab43Q8CG50 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab43Q8CG50 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.79■□□□□ 0.92
Rab43Q8CG50 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab43Q8CG50 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rab43Q8CG50 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
Rab43Q8CG50 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.79■□□□□ 0.92
Rab43Q8CG50 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab43Q8CG50 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab43Q8CG50 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rab43Q8CG50 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.78■□□□□ 0.92
Rab43Q8CG50 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.78■□□□□ 0.92
Rab43Q8CG50 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.78■□□□□ 0.92
Rab43Q8CG50 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.78■□□□□ 0.92
Rab43Q8CG50 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rab43Q8CG50 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Rab43Q8CG50 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab43Q8CG50 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab43Q8CG50 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.77■□□□□ 0.92
Rab43Q8CG50 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rab43Q8CG50 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab43Q8CG50 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rab43Q8CG50 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab43Q8CG50 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab43Q8CG50 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab43Q8CG50 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rab43Q8CG50 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab43Q8CG50 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab43Q8CG50 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab43Q8CG50 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab43Q8CG50 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.75■□□□□ 0.91
Rab43Q8CG50 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.75■□□□□ 0.91
Rab43Q8CG50 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab43Q8CG50 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab43Q8CG50 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rab43Q8CG50 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rab43Q8CG50 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.74■□□□□ 0.91
Rab43Q8CG50 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab43Q8CG50 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab43Q8CG50 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rab43Q8CG50 Gm12821-201ENSMUST00000120022 600 ntBASIC20.73■□□□□ 0.91
Rab43Q8CG50 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.73■□□□□ 0.91
Rab43Q8CG50 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.73■□□□□ 0.91
Rab43Q8CG50 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.73■□□□□ 0.91
Rab43Q8CG50 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rab43Q8CG50 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab43Q8CG50 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab43Q8CG50 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab43Q8CG50 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab43Q8CG50 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab43Q8CG50 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rab43Q8CG50 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.72■□□□□ 0.91
Rab43Q8CG50 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms