Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Smc2Q8CG48 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Smc2Q8CG48 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Smc2Q8CG48 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Smc2Q8CG48 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Smc2Q8CG48 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC24.36■■□□□ 1.49
Smc2Q8CG48 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smc2Q8CG48 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smc2Q8CG48 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC24.36■■□□□ 1.49
Smc2Q8CG48 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smc2Q8CG48 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
Smc2Q8CG48 Dmtn-209ENSMUST00000228295 2572 ntBASIC24.36■■□□□ 1.49
Smc2Q8CG48 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Smc2Q8CG48 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Smc2Q8CG48 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Smc2Q8CG48 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Smc2Q8CG48 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC24.35■■□□□ 1.49
Smc2Q8CG48 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Smc2Q8CG48 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Smc2Q8CG48 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc2Q8CG48 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc2Q8CG48 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc2Q8CG48 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.34■■□□□ 1.49
Smc2Q8CG48 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Smc2Q8CG48 Gm43592-201ENSMUST00000196922 1165 ntBASIC24.34■■□□□ 1.49
Smc2Q8CG48 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.34■■□□□ 1.49
Smc2Q8CG48 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Smc2Q8CG48 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Smc2Q8CG48 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC24.33■■□□□ 1.49
Smc2Q8CG48 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Smc2Q8CG48 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.33■■□□□ 1.49
Smc2Q8CG48 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC24.33■■□□□ 1.48
Smc2Q8CG48 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc2Q8CG48 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC24.32■■□□□ 1.48
Smc2Q8CG48 Gm10420-201ENSMUST00000121713 882 ntBASIC24.32■■□□□ 1.48
Smc2Q8CG48 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.32■■□□□ 1.48
Smc2Q8CG48 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Smc2Q8CG48 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Smc2Q8CG48 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Smc2Q8CG48 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC24.32■■□□□ 1.48
Smc2Q8CG48 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Smc2Q8CG48 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC24.3■■□□□ 1.48
Smc2Q8CG48 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc2Q8CG48 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc2Q8CG48 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc2Q8CG48 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc2Q8CG48 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.3■■□□□ 1.48
Smc2Q8CG48 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Smc2Q8CG48 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Smc2Q8CG48 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Smc2Q8CG48 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc2Q8CG48 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc2Q8CG48 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Smc2Q8CG48 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Smc2Q8CG48 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc2Q8CG48 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc2Q8CG48 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc2Q8CG48 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc2Q8CG48 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc2Q8CG48 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Smc2Q8CG48 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Smc2Q8CG48 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smc2Q8CG48 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
Smc2Q8CG48 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smc2Q8CG48 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smc2Q8CG48 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Smc2Q8CG48 Gm13042-201ENSMUST00000119244 1955 ntBASIC24.28■■□□□ 1.48
Smc2Q8CG48 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smc2Q8CG48 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Smc2Q8CG48 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Smc2Q8CG48 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Smc2Q8CG48 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Smc2Q8CG48 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC24.27■■□□□ 1.48
Smc2Q8CG48 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC24.27■■□□□ 1.48
Smc2Q8CG48 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.27■■□□□ 1.48
Smc2Q8CG48 Gm42418-201ENSMUST00000182010 1831 ntBASIC24.26■■□□□ 1.47
Smc2Q8CG48 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC24.26■■□□□ 1.47
Smc2Q8CG48 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Smc2Q8CG48 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Smc2Q8CG48 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Smc2Q8CG48 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Smc2Q8CG48 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Smc2Q8CG48 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Smc2Q8CG48 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Smc2Q8CG48 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smc2Q8CG48 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smc2Q8CG48 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.25■■□□□ 1.47
Smc2Q8CG48 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smc2Q8CG48 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smc2Q8CG48 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smc2Q8CG48 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Smc2Q8CG48 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Smc2Q8CG48 Gm37415-201ENSMUST00000192265 2054 ntBASIC24.24■■□□□ 1.47
Smc2Q8CG48 Nsd1-206ENSMUST00000224918 1001 ntBASIC24.24■■□□□ 1.47
Smc2Q8CG48 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Smc2Q8CG48 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Smc2Q8CG48 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Smc2Q8CG48 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Smc2Q8CG48 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Smc2Q8CG48 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms