Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb7Q8CDY9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb7Q8CDY9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb7Q8CDY9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pcdhb7Q8CDY9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb7Q8CDY9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhb7Q8CDY9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb7Q8CDY9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb7Q8CDY9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.28■■□□□ 1
Pcdhb7Q8CDY9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb7Q8CDY9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb7Q8CDY9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb7Q8CDY9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb7Q8CDY9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb7Q8CDY9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Pcdhb7Q8CDY9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb7Q8CDY9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb7Q8CDY9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb7Q8CDY9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Pcdhb7Q8CDY9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
Pcdhb7Q8CDY9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhb7Q8CDY9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Pcdhb7Q8CDY9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb7Q8CDY9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb7Q8CDY9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb7Q8CDY9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb7Q8CDY9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb7Q8CDY9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb7Q8CDY9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb7Q8CDY9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb7Q8CDY9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb7Q8CDY9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb7Q8CDY9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb7Q8CDY9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb7Q8CDY9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb7Q8CDY9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb7Q8CDY9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.24■□□□□ 0.99
Pcdhb7Q8CDY9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Pcdhb7Q8CDY9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb7Q8CDY9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pcdhb7Q8CDY9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Pcdhb7Q8CDY9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb7Q8CDY9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb7Q8CDY9 Cap2-205ENSMUST00000225824 1634 ntBASIC21.23■□□□□ 0.99
Pcdhb7Q8CDY9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb7Q8CDY9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb7Q8CDY9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb7Q8CDY9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb7Q8CDY9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb7Q8CDY9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb7Q8CDY9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb7Q8CDY9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Pcdhb7Q8CDY9 Gm10420-201ENSMUST00000121713 882 ntBASIC21.22■□□□□ 0.99
Pcdhb7Q8CDY9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb7Q8CDY9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb7Q8CDY9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb7Q8CDY9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb7Q8CDY9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb7Q8CDY9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb7Q8CDY9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.21■□□□□ 0.99
Pcdhb7Q8CDY9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb7Q8CDY9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb7Q8CDY9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pcdhb7Q8CDY9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb7Q8CDY9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb7Q8CDY9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb7Q8CDY9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb7Q8CDY9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Pcdhb7Q8CDY9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdhb7Q8CDY9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pcdhb7Q8CDY9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb7Q8CDY9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pcdhb7Q8CDY9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb7Q8CDY9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Pcdhb7Q8CDY9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb7Q8CDY9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb7Q8CDY9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Pcdhb7Q8CDY9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb7Q8CDY9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb7Q8CDY9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb7Q8CDY9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb7Q8CDY9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Pcdhb7Q8CDY9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb7Q8CDY9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb7Q8CDY9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb7Q8CDY9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb7Q8CDY9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb7Q8CDY9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.17■□□□□ 0.98
Pcdhb7Q8CDY9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pcdhb7Q8CDY9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb7Q8CDY9 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.17■□□□□ 0.98
Pcdhb7Q8CDY9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb7Q8CDY9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb7Q8CDY9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb7Q8CDY9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb7Q8CDY9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb7Q8CDY9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb7Q8CDY9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhb7Q8CDY9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb7Q8CDY9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms