Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm9847-201ENSMUST00000052528 599 ntBASIC26.8■■□□□ 1.88
Trim52Q8CDV4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Trim52Q8CDV4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trim52Q8CDV4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trim52Q8CDV4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
Trim52Q8CDV4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trim52Q8CDV4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Trim52Q8CDV4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.78■■□□□ 1.88
Trim52Q8CDV4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Trim52Q8CDV4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Trim52Q8CDV4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Trim52Q8CDV4 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trim52Q8CDV4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.77■■□□□ 1.88
Trim52Q8CDV4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trim52Q8CDV4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC26.77■■□□□ 1.88
Trim52Q8CDV4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC26.77■■□□□ 1.88
Trim52Q8CDV4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trim52Q8CDV4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trim52Q8CDV4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Trim52Q8CDV4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC26.76■■□□□ 1.87
Trim52Q8CDV4 Gm12922-201ENSMUST00000120626 809 ntBASIC26.76■■□□□ 1.87
Trim52Q8CDV4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC26.76■■□□□ 1.87
Trim52Q8CDV4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Trim52Q8CDV4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC26.75■■□□□ 1.87
Trim52Q8CDV4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
Trim52Q8CDV4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC26.75■■□□□ 1.87
Trim52Q8CDV4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
Trim52Q8CDV4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Trim52Q8CDV4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC26.74■■□□□ 1.87
Trim52Q8CDV4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC26.74■■□□□ 1.87
Trim52Q8CDV4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC26.74■■□□□ 1.87
Trim52Q8CDV4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Trim52Q8CDV4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC26.72■■□□□ 1.87
Trim52Q8CDV4 Gm43034-201ENSMUST00000198678 1364 ntBASIC26.72■■□□□ 1.87
Trim52Q8CDV4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
Trim52Q8CDV4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Trim52Q8CDV4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
Trim52Q8CDV4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Trim52Q8CDV4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Trim52Q8CDV4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Trim52Q8CDV4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Trim52Q8CDV4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Trim52Q8CDV4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Trim52Q8CDV4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Trim52Q8CDV4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
Trim52Q8CDV4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Trim52Q8CDV4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Trim52Q8CDV4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Trim52Q8CDV4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Trim52Q8CDV4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Trim52Q8CDV4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Trim52Q8CDV4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 AC116713.1-201ENSMUST00000215074 430 ntBASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Trim52Q8CDV4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC26.68■■□□□ 1.86
Trim52Q8CDV4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC26.68■■□□□ 1.86
Trim52Q8CDV4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trim52Q8CDV4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trim52Q8CDV4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Trim52Q8CDV4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
Trim52Q8CDV4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Trim52Q8CDV4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC26.67■■□□□ 1.86
Trim52Q8CDV4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Trim52Q8CDV4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC26.66■■□□□ 1.86
Trim52Q8CDV4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC26.66■■□□□ 1.86
Trim52Q8CDV4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Trim52Q8CDV4 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
Trim52Q8CDV4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC26.65■■□□□ 1.86
Trim52Q8CDV4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim52Q8CDV4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Trim52Q8CDV4 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.65■■□□□ 1.86
Trim52Q8CDV4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim52Q8CDV4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim52Q8CDV4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim52Q8CDV4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Trim52Q8CDV4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Trim52Q8CDV4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Trim52Q8CDV4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC26.64■■□□□ 1.85
Trim52Q8CDV4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC26.64■■□□□ 1.85
Trim52Q8CDV4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Trim52Q8CDV4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC26.63■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms