Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim9Q8C7M3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim9Q8C7M3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim9Q8C7M3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Trim9Q8C7M3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Trim9Q8C7M3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim9Q8C7M3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim9Q8C7M3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Trim9Q8C7M3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Trim9Q8C7M3 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.66■■□□□ 1.38
Trim9Q8C7M3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trim9Q8C7M3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim9Q8C7M3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim9Q8C7M3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Trim9Q8C7M3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Trim9Q8C7M3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim9Q8C7M3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Trim9Q8C7M3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim9Q8C7M3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.63■■□□□ 1.37
Trim9Q8C7M3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim9Q8C7M3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim9Q8C7M3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim9Q8C7M3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim9Q8C7M3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Trim9Q8C7M3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim9Q8C7M3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim9Q8C7M3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim9Q8C7M3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim9Q8C7M3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim9Q8C7M3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim9Q8C7M3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Trim9Q8C7M3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.61■■□□□ 1.37
Trim9Q8C7M3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim9Q8C7M3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim9Q8C7M3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim9Q8C7M3 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.6■■□□□ 1.37
Trim9Q8C7M3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.6■■□□□ 1.37
Trim9Q8C7M3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim9Q8C7M3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim9Q8C7M3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim9Q8C7M3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Trim9Q8C7M3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim9Q8C7M3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
Trim9Q8C7M3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim9Q8C7M3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim9Q8C7M3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim9Q8C7M3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Trim9Q8C7M3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Trim9Q8C7M3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.58■■□□□ 1.37
Trim9Q8C7M3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trim9Q8C7M3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trim9Q8C7M3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Trim9Q8C7M3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.57■■□□□ 1.36
Trim9Q8C7M3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.57■■□□□ 1.36
Trim9Q8C7M3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.57■■□□□ 1.36
Trim9Q8C7M3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim9Q8C7M3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trim9Q8C7M3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Trim9Q8C7M3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim9Q8C7M3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.56■■□□□ 1.36
Trim9Q8C7M3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Trim9Q8C7M3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trim9Q8C7M3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.55■■□□□ 1.36
Trim9Q8C7M3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim9Q8C7M3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim9Q8C7M3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC23.55■■□□□ 1.36
Trim9Q8C7M3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim9Q8C7M3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.54■■□□□ 1.36
Trim9Q8C7M3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim9Q8C7M3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim9Q8C7M3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim9Q8C7M3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim9Q8C7M3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim9Q8C7M3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim9Q8C7M3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim9Q8C7M3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trim9Q8C7M3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.52■■□□□ 1.36
Trim9Q8C7M3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Trim9Q8C7M3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.52■■□□□ 1.36
Trim9Q8C7M3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.52■■□□□ 1.36
Trim9Q8C7M3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim9Q8C7M3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trim9Q8C7M3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim9Q8C7M3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Trim9Q8C7M3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Trim9Q8C7M3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.51■■□□□ 1.35
Trim9Q8C7M3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim9Q8C7M3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim9Q8C7M3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim9Q8C7M3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim9Q8C7M3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim9Q8C7M3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.51■■□□□ 1.35
Trim9Q8C7M3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.5■■□□□ 1.35
Trim9Q8C7M3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Trim9Q8C7M3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.5■■□□□ 1.35
Trim9Q8C7M3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Trim9Q8C7M3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim9Q8C7M3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
Trim9Q8C7M3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trim9Q8C7M3 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms