Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a6Q8C6K9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a6Q8C6K9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.4■□□□□ 0.7
Col6a6Q8C6K9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.4■□□□□ 0.7
Col6a6Q8C6K9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a6Q8C6K9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.4■□□□□ 0.7
Col6a6Q8C6K9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Col6a6Q8C6K9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.4■□□□□ 0.7
Col6a6Q8C6K9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.39■□□□□ 0.69
Col6a6Q8C6K9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col6a6Q8C6K9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Col6a6Q8C6K9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Col6a6Q8C6K9 Gm6139-201ENSMUST00000079261 882 ntBASIC19.39■□□□□ 0.69
Col6a6Q8C6K9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Col6a6Q8C6K9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col6a6Q8C6K9 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Col6a6Q8C6K9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col6a6Q8C6K9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Col6a6Q8C6K9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col6a6Q8C6K9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.38■□□□□ 0.69
Col6a6Q8C6K9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.38■□□□□ 0.69
Col6a6Q8C6K9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a6Q8C6K9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Col6a6Q8C6K9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a6Q8C6K9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a6Q8C6K9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Col6a6Q8C6K9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Col6a6Q8C6K9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a6Q8C6K9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a6Q8C6K9 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Col6a6Q8C6K9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Col6a6Q8C6K9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Col6a6Q8C6K9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a6Q8C6K9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a6Q8C6K9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a6Q8C6K9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Col6a6Q8C6K9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Col6a6Q8C6K9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.35■□□□□ 0.69
Col6a6Q8C6K9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a6Q8C6K9 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.35■□□□□ 0.69
Col6a6Q8C6K9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a6Q8C6K9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a6Q8C6K9 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a6Q8C6K9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a6Q8C6K9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Col6a6Q8C6K9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.35■□□□□ 0.69
Col6a6Q8C6K9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.35■□□□□ 0.69
Col6a6Q8C6K9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Col6a6Q8C6K9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.34■□□□□ 0.69
Col6a6Q8C6K9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Col6a6Q8C6K9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col6a6Q8C6K9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Col6a6Q8C6K9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Col6a6Q8C6K9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.33■□□□□ 0.68
Col6a6Q8C6K9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.33■□□□□ 0.68
Col6a6Q8C6K9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
Col6a6Q8C6K9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a6Q8C6K9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a6Q8C6K9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a6Q8C6K9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a6Q8C6K9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a6Q8C6K9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a6Q8C6K9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a6Q8C6K9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Col6a6Q8C6K9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col6a6Q8C6K9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col6a6Q8C6K9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Col6a6Q8C6K9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Col6a6Q8C6K9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.31■□□□□ 0.68
Col6a6Q8C6K9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Col6a6Q8C6K9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col6a6Q8C6K9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col6a6Q8C6K9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Col6a6Q8C6K9 Gm8495-201ENSMUST00000188740 694 ntBASIC19.31■□□□□ 0.68
Col6a6Q8C6K9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Col6a6Q8C6K9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Col6a6Q8C6K9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col6a6Q8C6K9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col6a6Q8C6K9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Col6a6Q8C6K9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col6a6Q8C6K9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.3■□□□□ 0.68
Col6a6Q8C6K9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col6a6Q8C6K9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Col6a6Q8C6K9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Col6a6Q8C6K9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Col6a6Q8C6K9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col6a6Q8C6K9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Col6a6Q8C6K9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col6a6Q8C6K9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col6a6Q8C6K9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Col6a6Q8C6K9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col6a6Q8C6K9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col6a6Q8C6K9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Col6a6Q8C6K9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col6a6Q8C6K9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col6a6Q8C6K9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Col6a6Q8C6K9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.27■□□□□ 0.68
Col6a6Q8C6K9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col6a6Q8C6K9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Col6a6Q8C6K9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms