Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Eri3Q8C460 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Eri3Q8C460 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Eri3Q8C460 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Eri3Q8C460 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Eri3Q8C460 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Eri3Q8C460 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Eri3Q8C460 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Eri3Q8C460 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Eri3Q8C460 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.26■□□□□ 0.83
Eri3Q8C460 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.26■□□□□ 0.83
Eri3Q8C460 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Eri3Q8C460 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Eri3Q8C460 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Eri3Q8C460 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Eri3Q8C460 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.25■□□□□ 0.83
Eri3Q8C460 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Eri3Q8C460 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Eri3Q8C460 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Eri3Q8C460 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Eri3Q8C460 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Eri3Q8C460 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Eri3Q8C460 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Eri3Q8C460 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.24■□□□□ 0.83
Eri3Q8C460 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Eri3Q8C460 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Eri3Q8C460 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.24■□□□□ 0.83
Eri3Q8C460 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Eri3Q8C460 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.23■□□□□ 0.83
Eri3Q8C460 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.23■□□□□ 0.83
Eri3Q8C460 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Eri3Q8C460 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Eri3Q8C460 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Eri3Q8C460 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Eri3Q8C460 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Eri3Q8C460 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Eri3Q8C460 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.22■□□□□ 0.83
Eri3Q8C460 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Eri3Q8C460 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.22■□□□□ 0.83
Eri3Q8C460 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Eri3Q8C460 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Eri3Q8C460 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Eri3Q8C460 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Eri3Q8C460 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Eri3Q8C460 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Eri3Q8C460 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Eri3Q8C460 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Eri3Q8C460 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Eri3Q8C460 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Eri3Q8C460 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Eri3Q8C460 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Eri3Q8C460 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Eri3Q8C460 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Eri3Q8C460 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Eri3Q8C460 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Eri3Q8C460 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Eri3Q8C460 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.2■□□□□ 0.82
Eri3Q8C460 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Eri3Q8C460 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Eri3Q8C460 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Eri3Q8C460 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Eri3Q8C460 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Eri3Q8C460 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Eri3Q8C460 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Eri3Q8C460 Gm13238-201ENSMUST00000117655 780 ntBASIC20.19■□□□□ 0.82
Eri3Q8C460 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Eri3Q8C460 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Eri3Q8C460 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Eri3Q8C460 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Eri3Q8C460 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.18■□□□□ 0.82
Eri3Q8C460 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Eri3Q8C460 Gm43566-201ENSMUST00000196851 808 ntBASIC20.18■□□□□ 0.82
Eri3Q8C460 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Eri3Q8C460 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Eri3Q8C460 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Eri3Q8C460 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.17■□□□□ 0.82
Eri3Q8C460 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Eri3Q8C460 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Eri3Q8C460 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Eri3Q8C460 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Eri3Q8C460 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Eri3Q8C460 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Eri3Q8C460 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.16■□□□□ 0.82
Eri3Q8C460 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Eri3Q8C460 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Eri3Q8C460 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Eri3Q8C460 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Eri3Q8C460 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Eri3Q8C460 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Eri3Q8C460 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Eri3Q8C460 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.15■□□□□ 0.82
Eri3Q8C460 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Eri3Q8C460 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.15■□□□□ 0.82
Eri3Q8C460 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Eri3Q8C460 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.14■□□□□ 0.82
Eri3Q8C460 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Eri3Q8C460 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Eri3Q8C460 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Eri3Q8C460 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Eri3Q8C460 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms