Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Cps1Q8C196 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
Cps1Q8C196 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Cps1Q8C196 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Cps1Q8C196 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC29.57■■■□□ 2.33
Cps1Q8C196 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Cps1Q8C196 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Cps1Q8C196 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC29.57■■■□□ 2.32
Cps1Q8C196 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Cps1Q8C196 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC29.56■■■□□ 2.32
Cps1Q8C196 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Cps1Q8C196 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Cps1Q8C196 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC29.56■■■□□ 2.32
Cps1Q8C196 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC29.56■■■□□ 2.32
Cps1Q8C196 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
Cps1Q8C196 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC29.55■■■□□ 2.32
Cps1Q8C196 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Cps1Q8C196 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Cps1Q8C196 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC29.55■■■□□ 2.32
Cps1Q8C196 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
Cps1Q8C196 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Cps1Q8C196 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC29.55■■■□□ 2.32
Cps1Q8C196 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC29.55■■■□□ 2.32
Cps1Q8C196 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Cps1Q8C196 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Cps1Q8C196 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Cps1Q8C196 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Cps1Q8C196 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Cps1Q8C196 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Cps1Q8C196 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Cps1Q8C196 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Cps1Q8C196 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
Cps1Q8C196 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Cps1Q8C196 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
Cps1Q8C196 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC29.51■■■□□ 2.32
Cps1Q8C196 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Cps1Q8C196 Gm6934-201ENSMUST00000194780 1905 ntBASIC29.51■■■□□ 2.31
Cps1Q8C196 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Cps1Q8C196 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Cps1Q8C196 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Cps1Q8C196 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Cps1Q8C196 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Cps1Q8C196 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Cps1Q8C196 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Cps1Q8C196 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Cps1Q8C196 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Cps1Q8C196 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Cps1Q8C196 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Cps1Q8C196 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Cps1Q8C196 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC29.48■■■□□ 2.31
Cps1Q8C196 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Cps1Q8C196 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Cps1Q8C196 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC29.47■■■□□ 2.31
Cps1Q8C196 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Cps1Q8C196 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
Cps1Q8C196 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Cps1Q8C196 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Cps1Q8C196 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Cps1Q8C196 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Cps1Q8C196 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
Cps1Q8C196 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
Cps1Q8C196 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC29.46■■■□□ 2.31
Cps1Q8C196 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Cps1Q8C196 Gm2011-201ENSMUST00000203124 1263 ntBASIC29.45■■■□□ 2.31
Cps1Q8C196 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Cps1Q8C196 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC29.45■■■□□ 2.31
Cps1Q8C196 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Cps1Q8C196 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Cps1Q8C196 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Cps1Q8C196 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
Cps1Q8C196 Slc35b2-207ENSMUST00000226086 850 ntBASIC29.44■■■□□ 2.3
Cps1Q8C196 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Cps1Q8C196 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Cps1Q8C196 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Cps1Q8C196 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC29.43■■■□□ 2.3
Cps1Q8C196 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC29.43■■■□□ 2.3
Cps1Q8C196 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Cps1Q8C196 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Cps1Q8C196 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC29.43■■■□□ 2.3
Cps1Q8C196 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Cps1Q8C196 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC29.41■■■□□ 2.3
Cps1Q8C196 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
Cps1Q8C196 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Cps1Q8C196 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Cps1Q8C196 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC29.4■■■□□ 2.3
Cps1Q8C196 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Cps1Q8C196 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
Cps1Q8C196 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Cps1Q8C196 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Cps1Q8C196 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
Cps1Q8C196 Gm5297-201ENSMUST00000198555 1171 ntBASIC29.39■■■□□ 2.3
Cps1Q8C196 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
Cps1Q8C196 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC29.39■■■□□ 2.29
Cps1Q8C196 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Cps1Q8C196 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
Cps1Q8C196 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC29.38■■■□□ 2.29
Cps1Q8C196 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
Cps1Q8C196 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
Cps1Q8C196 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC29.38■■■□□ 2.29
Cps1Q8C196 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC29.38■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms