Protein–RNA interactions for Protein: Q8BW22

Ss18l1, Calcium-responsive transactivator, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18l1Q8BW22 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ss18l1Q8BW22 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ss18l1Q8BW22 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ss18l1Q8BW22 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ss18l1Q8BW22 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ss18l1Q8BW22 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ss18l1Q8BW22 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
Ss18l1Q8BW22 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ss18l1Q8BW22 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ss18l1Q8BW22 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ss18l1Q8BW22 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ss18l1Q8BW22 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ss18l1Q8BW22 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ss18l1Q8BW22 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ss18l1Q8BW22 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ss18l1Q8BW22 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ss18l1Q8BW22 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ss18l1Q8BW22 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.09■□□□□ 0.65
Ss18l1Q8BW22 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ss18l1Q8BW22 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.09■□□□□ 0.65
Ss18l1Q8BW22 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ss18l1Q8BW22 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ss18l1Q8BW22 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ss18l1Q8BW22 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Ss18l1Q8BW22 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ss18l1Q8BW22 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.08■□□□□ 0.65
Ss18l1Q8BW22 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Ss18l1Q8BW22 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ss18l1Q8BW22 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ss18l1Q8BW22 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ss18l1Q8BW22 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ss18l1Q8BW22 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ss18l1Q8BW22 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ss18l1Q8BW22 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ss18l1Q8BW22 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ss18l1Q8BW22 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.07■□□□□ 0.64
Ss18l1Q8BW22 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ss18l1Q8BW22 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ss18l1Q8BW22 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ss18l1Q8BW22 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.06■□□□□ 0.64
Ss18l1Q8BW22 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ss18l1Q8BW22 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ss18l1Q8BW22 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ss18l1Q8BW22 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ss18l1Q8BW22 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.06■□□□□ 0.64
Ss18l1Q8BW22 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ss18l1Q8BW22 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ss18l1Q8BW22 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ss18l1Q8BW22 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ss18l1Q8BW22 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.04■□□□□ 0.64
Ss18l1Q8BW22 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ss18l1Q8BW22 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ss18l1Q8BW22 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ss18l1Q8BW22 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ss18l1Q8BW22 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ss18l1Q8BW22 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ss18l1Q8BW22 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ss18l1Q8BW22 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ss18l1Q8BW22 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.03■□□□□ 0.64
Ss18l1Q8BW22 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Ss18l1Q8BW22 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ss18l1Q8BW22 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ss18l1Q8BW22 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ss18l1Q8BW22 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ss18l1Q8BW22 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ss18l1Q8BW22 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ss18l1Q8BW22 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.02■□□□□ 0.64
Ss18l1Q8BW22 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ss18l1Q8BW22 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ss18l1Q8BW22 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ss18l1Q8BW22 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.01■□□□□ 0.63
Ss18l1Q8BW22 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ss18l1Q8BW22 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.01■□□□□ 0.63
Ss18l1Q8BW22 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ss18l1Q8BW22 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19■□□□□ 0.63
Ss18l1Q8BW22 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ss18l1Q8BW22 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ss18l1Q8BW22 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ss18l1Q8BW22 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ss18l1Q8BW22 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ss18l1Q8BW22 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Ss18l1Q8BW22 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ss18l1Q8BW22 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ss18l1Q8BW22 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.99■□□□□ 0.63
Ss18l1Q8BW22 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ss18l1Q8BW22 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ss18l1Q8BW22 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Ss18l1Q8BW22 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ss18l1Q8BW22 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.99■□□□□ 0.63
Ss18l1Q8BW22 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ss18l1Q8BW22 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ss18l1Q8BW22 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ss18l1Q8BW22 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.98■□□□□ 0.63
Ss18l1Q8BW22 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
Ss18l1Q8BW22 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ss18l1Q8BW22 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ss18l1Q8BW22 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ss18l1Q8BW22 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ss18l1Q8BW22 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ss18l1Q8BW22 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms