Protein–RNA interactions for Protein: Q8BV16

Zfp398, Zinc finger protein 398, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp398Q8BV16 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Zfp398Q8BV16 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.35■■□□□ 1.01
Zfp398Q8BV16 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Zfp398Q8BV16 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zfp398Q8BV16 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zfp398Q8BV16 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.34■■□□□ 1.01
Zfp398Q8BV16 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zfp398Q8BV16 Gm27502-201ENSMUST00000183495 199 ntBASIC21.34■■□□□ 1.01
Zfp398Q8BV16 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zfp398Q8BV16 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Zfp398Q8BV16 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zfp398Q8BV16 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zfp398Q8BV16 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zfp398Q8BV16 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zfp398Q8BV16 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Zfp398Q8BV16 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Zfp398Q8BV16 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Zfp398Q8BV16 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Zfp398Q8BV16 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.33■■□□□ 1
Zfp398Q8BV16 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Zfp398Q8BV16 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Zfp398Q8BV16 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Zfp398Q8BV16 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zfp398Q8BV16 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Zfp398Q8BV16 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Zfp398Q8BV16 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Zfp398Q8BV16 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Zfp398Q8BV16 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.32■■□□□ 1
Zfp398Q8BV16 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.32■■□□□ 1
Zfp398Q8BV16 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.32■■□□□ 1
Zfp398Q8BV16 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zfp398Q8BV16 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.31■■□□□ 1
Zfp398Q8BV16 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zfp398Q8BV16 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.31■■□□□ 1
Zfp398Q8BV16 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Zfp398Q8BV16 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Zfp398Q8BV16 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Zfp398Q8BV16 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Zfp398Q8BV16 Gm11175-201ENSMUST00000116172 543 ntBASIC21.3■■□□□ 1
Zfp398Q8BV16 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Zfp398Q8BV16 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.3■■□□□ 1
Zfp398Q8BV16 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.29■■□□□ 1
Zfp398Q8BV16 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Zfp398Q8BV16 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zfp398Q8BV16 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Zfp398Q8BV16 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Zfp398Q8BV16 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.29■■□□□ 1
Zfp398Q8BV16 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zfp398Q8BV16 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zfp398Q8BV16 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zfp398Q8BV16 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Zfp398Q8BV16 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.28■■□□□ 1
Zfp398Q8BV16 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.28■■□□□ 1
Zfp398Q8BV16 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zfp398Q8BV16 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zfp398Q8BV16 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Zfp398Q8BV16 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.27■■□□□ 1
Zfp398Q8BV16 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Zfp398Q8BV16 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.27■■□□□ 1
Zfp398Q8BV16 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.27■■□□□ 1
Zfp398Q8BV16 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.27■□□□□ 0.99
Zfp398Q8BV16 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Zfp398Q8BV16 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Zfp398Q8BV16 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.26■□□□□ 0.99
Zfp398Q8BV16 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.26■□□□□ 0.99
Zfp398Q8BV16 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.26■□□□□ 0.99
Zfp398Q8BV16 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Zfp398Q8BV16 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Zfp398Q8BV16 Gm14523-201ENSMUST00000117260 558 ntBASIC21.25■□□□□ 0.99
Zfp398Q8BV16 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Zfp398Q8BV16 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zfp398Q8BV16 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zfp398Q8BV16 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zfp398Q8BV16 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zfp398Q8BV16 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Zfp398Q8BV16 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Zfp398Q8BV16 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Zfp398Q8BV16 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp398Q8BV16 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp398Q8BV16 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp398Q8BV16 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp398Q8BV16 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.23■□□□□ 0.99
Zfp398Q8BV16 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.23■□□□□ 0.99
Zfp398Q8BV16 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp398Q8BV16 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.23■□□□□ 0.99
Zfp398Q8BV16 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Zfp398Q8BV16 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp398Q8BV16 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp398Q8BV16 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp398Q8BV16 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Zfp398Q8BV16 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Zfp398Q8BV16 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Zfp398Q8BV16 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zfp398Q8BV16 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zfp398Q8BV16 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Zfp398Q8BV16 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Zfp398Q8BV16 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zfp398Q8BV16 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zfp398Q8BV16 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Zfp398Q8BV16 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms