Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpne3Q8BT60 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Cpne3Q8BT60 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpne3Q8BT60 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpne3Q8BT60 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.49■□□□□ 0.87
Cpne3Q8BT60 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cpne3Q8BT60 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Cpne3Q8BT60 Gm27502-201ENSMUST00000183495 199 ntBASIC20.49■□□□□ 0.87
Cpne3Q8BT60 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Cpne3Q8BT60 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cpne3Q8BT60 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
Cpne3Q8BT60 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.48■□□□□ 0.87
Cpne3Q8BT60 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cpne3Q8BT60 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cpne3Q8BT60 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpne3Q8BT60 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpne3Q8BT60 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpne3Q8BT60 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cpne3Q8BT60 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Cpne3Q8BT60 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cpne3Q8BT60 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cpne3Q8BT60 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cpne3Q8BT60 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.47■□□□□ 0.87
Cpne3Q8BT60 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cpne3Q8BT60 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Cpne3Q8BT60 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Cpne3Q8BT60 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cpne3Q8BT60 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpne3Q8BT60 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.46■□□□□ 0.87
Cpne3Q8BT60 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cpne3Q8BT60 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Cpne3Q8BT60 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpne3Q8BT60 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cpne3Q8BT60 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cpne3Q8BT60 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpne3Q8BT60 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpne3Q8BT60 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpne3Q8BT60 Gm11175-201ENSMUST00000116172 543 ntBASIC20.45■□□□□ 0.86
Cpne3Q8BT60 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.45■□□□□ 0.86
Cpne3Q8BT60 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.45■□□□□ 0.86
Cpne3Q8BT60 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpne3Q8BT60 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cpne3Q8BT60 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpne3Q8BT60 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cpne3Q8BT60 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cpne3Q8BT60 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cpne3Q8BT60 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.44■□□□□ 0.86
Cpne3Q8BT60 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cpne3Q8BT60 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.43■□□□□ 0.86
Cpne3Q8BT60 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.42■□□□□ 0.86
Cpne3Q8BT60 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpne3Q8BT60 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cpne3Q8BT60 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.42■□□□□ 0.86
Cpne3Q8BT60 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Cpne3Q8BT60 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cpne3Q8BT60 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.42■□□□□ 0.86
Cpne3Q8BT60 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cpne3Q8BT60 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpne3Q8BT60 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cpne3Q8BT60 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cpne3Q8BT60 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cpne3Q8BT60 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpne3Q8BT60 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cpne3Q8BT60 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cpne3Q8BT60 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.4■□□□□ 0.86
Cpne3Q8BT60 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cpne3Q8BT60 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpne3Q8BT60 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpne3Q8BT60 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpne3Q8BT60 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cpne3Q8BT60 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cpne3Q8BT60 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cpne3Q8BT60 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cpne3Q8BT60 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cpne3Q8BT60 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpne3Q8BT60 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpne3Q8BT60 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cpne3Q8BT60 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cpne3Q8BT60 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpne3Q8BT60 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpne3Q8BT60 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpne3Q8BT60 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpne3Q8BT60 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpne3Q8BT60 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cpne3Q8BT60 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cpne3Q8BT60 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpne3Q8BT60 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cpne3Q8BT60 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.37■□□□□ 0.85
Cpne3Q8BT60 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.37■□□□□ 0.85
Cpne3Q8BT60 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cpne3Q8BT60 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpne3Q8BT60 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpne3Q8BT60 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpne3Q8BT60 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpne3Q8BT60 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpne3Q8BT60 Gm14523-201ENSMUST00000117260 558 ntBASIC20.36■□□□□ 0.85
Cpne3Q8BT60 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpne3Q8BT60 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpne3Q8BT60 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cpne3Q8BT60 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms