Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Smco3Q8BQM7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smco3Q8BQM7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Smco3Q8BQM7 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.44■□□□□ 0.38
Smco3Q8BQM7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smco3Q8BQM7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Smco3Q8BQM7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smco3Q8BQM7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Smco3Q8BQM7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smco3Q8BQM7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
Smco3Q8BQM7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Smco3Q8BQM7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smco3Q8BQM7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smco3Q8BQM7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smco3Q8BQM7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.43■□□□□ 0.38
Smco3Q8BQM7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Smco3Q8BQM7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smco3Q8BQM7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Smco3Q8BQM7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Smco3Q8BQM7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Smco3Q8BQM7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.42■□□□□ 0.38
Smco3Q8BQM7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smco3Q8BQM7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Smco3Q8BQM7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smco3Q8BQM7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smco3Q8BQM7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smco3Q8BQM7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.41■□□□□ 0.38
Smco3Q8BQM7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Smco3Q8BQM7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Smco3Q8BQM7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Smco3Q8BQM7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.41■□□□□ 0.38
Smco3Q8BQM7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.41■□□□□ 0.38
Smco3Q8BQM7 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Smco3Q8BQM7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smco3Q8BQM7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smco3Q8BQM7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smco3Q8BQM7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smco3Q8BQM7 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Smco3Q8BQM7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Smco3Q8BQM7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.4■□□□□ 0.38
Smco3Q8BQM7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smco3Q8BQM7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Smco3Q8BQM7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Smco3Q8BQM7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Smco3Q8BQM7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.39■□□□□ 0.37
Smco3Q8BQM7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Smco3Q8BQM7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smco3Q8BQM7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Smco3Q8BQM7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Smco3Q8BQM7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smco3Q8BQM7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Smco3Q8BQM7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smco3Q8BQM7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smco3Q8BQM7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Smco3Q8BQM7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Smco3Q8BQM7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Smco3Q8BQM7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Smco3Q8BQM7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Smco3Q8BQM7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smco3Q8BQM7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.37■□□□□ 0.37
Smco3Q8BQM7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smco3Q8BQM7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Smco3Q8BQM7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smco3Q8BQM7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Smco3Q8BQM7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Smco3Q8BQM7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smco3Q8BQM7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Smco3Q8BQM7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Smco3Q8BQM7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smco3Q8BQM7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smco3Q8BQM7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smco3Q8BQM7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smco3Q8BQM7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smco3Q8BQM7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Smco3Q8BQM7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smco3Q8BQM7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Smco3Q8BQM7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smco3Q8BQM7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smco3Q8BQM7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smco3Q8BQM7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.35■□□□□ 0.37
Smco3Q8BQM7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.35■□□□□ 0.37
Smco3Q8BQM7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smco3Q8BQM7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smco3Q8BQM7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.35■□□□□ 0.37
Smco3Q8BQM7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smco3Q8BQM7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smco3Q8BQM7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.35■□□□□ 0.37
Smco3Q8BQM7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smco3Q8BQM7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smco3Q8BQM7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Smco3Q8BQM7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smco3Q8BQM7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smco3Q8BQM7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smco3Q8BQM7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Smco3Q8BQM7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smco3Q8BQM7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smco3Q8BQM7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.34■□□□□ 0.37
Smco3Q8BQM7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Smco3Q8BQM7 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smco3Q8BQM7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms