Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
Cdkl3Q8BLF2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl3Q8BLF2 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.3■□□□□ 0.52
Cdkl3Q8BLF2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl3Q8BLF2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl3Q8BLF2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl3Q8BLF2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdkl3Q8BLF2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkl3Q8BLF2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkl3Q8BLF2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkl3Q8BLF2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cdkl3Q8BLF2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdkl3Q8BLF2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Cdkl3Q8BLF2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkl3Q8BLF2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkl3Q8BLF2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkl3Q8BLF2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkl3Q8BLF2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkl3Q8BLF2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cdkl3Q8BLF2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkl3Q8BLF2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdkl3Q8BLF2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkl3Q8BLF2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Cdkl3Q8BLF2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkl3Q8BLF2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkl3Q8BLF2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cdkl3Q8BLF2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Cdkl3Q8BLF2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdkl3Q8BLF2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdkl3Q8BLF2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkl3Q8BLF2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkl3Q8BLF2 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.26■□□□□ 0.51
Cdkl3Q8BLF2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkl3Q8BLF2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.26■□□□□ 0.51
Cdkl3Q8BLF2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdkl3Q8BLF2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cdkl3Q8BLF2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkl3Q8BLF2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkl3Q8BLF2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkl3Q8BLF2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkl3Q8BLF2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkl3Q8BLF2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkl3Q8BLF2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkl3Q8BLF2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdkl3Q8BLF2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkl3Q8BLF2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.24■□□□□ 0.51
Cdkl3Q8BLF2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cdkl3Q8BLF2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkl3Q8BLF2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cdkl3Q8BLF2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkl3Q8BLF2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkl3Q8BLF2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkl3Q8BLF2 Golph3-202ENSMUST00000226517 2359 ntBASIC18.23■□□□□ 0.51
Cdkl3Q8BLF2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkl3Q8BLF2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdkl3Q8BLF2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdkl3Q8BLF2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdkl3Q8BLF2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cdkl3Q8BLF2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdkl3Q8BLF2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdkl3Q8BLF2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cdkl3Q8BLF2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cdkl3Q8BLF2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdkl3Q8BLF2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdkl3Q8BLF2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdkl3Q8BLF2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.21■□□□□ 0.51
Cdkl3Q8BLF2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdkl3Q8BLF2 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdkl3Q8BLF2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdkl3Q8BLF2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdkl3Q8BLF2 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdkl3Q8BLF2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdkl3Q8BLF2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdkl3Q8BLF2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cdkl3Q8BLF2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl3Q8BLF2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl3Q8BLF2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl3Q8BLF2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl3Q8BLF2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl3Q8BLF2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl3Q8BLF2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl3Q8BLF2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cdkl3Q8BLF2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl3Q8BLF2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl3Q8BLF2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl3Q8BLF2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.18■□□□□ 0.5
Cdkl3Q8BLF2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl3Q8BLF2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Cdkl3Q8BLF2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl3Q8BLF2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl3Q8BLF2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl3Q8BLF2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl3Q8BLF2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl3Q8BLF2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl3Q8BLF2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl3Q8BLF2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cdkl3Q8BLF2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cdkl3Q8BLF2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.17■□□□□ 0.5
Cdkl3Q8BLF2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl3Q8BLF2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms