Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc116Q80X53 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc116Q80X53 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Ccdc116Q80X53 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.92■□□□□ 0.94
Ccdc116Q80X53 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc116Q80X53 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc116Q80X53 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc116Q80X53 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Ccdc116Q80X53 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc116Q80X53 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Ccdc116Q80X53 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc116Q80X53 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc116Q80X53 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccdc116Q80X53 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ccdc116Q80X53 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc116Q80X53 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.91■□□□□ 0.94
Ccdc116Q80X53 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccdc116Q80X53 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Ccdc116Q80X53 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc116Q80X53 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.9■□□□□ 0.94
Ccdc116Q80X53 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ccdc116Q80X53 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.9■□□□□ 0.94
Ccdc116Q80X53 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc116Q80X53 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccdc116Q80X53 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc116Q80X53 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc116Q80X53 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccdc116Q80X53 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Ccdc116Q80X53 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.88■□□□□ 0.93
Ccdc116Q80X53 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.88■□□□□ 0.93
Ccdc116Q80X53 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ccdc116Q80X53 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc116Q80X53 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc116Q80X53 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc116Q80X53 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ccdc116Q80X53 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.87■□□□□ 0.93
Ccdc116Q80X53 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.86■□□□□ 0.93
Ccdc116Q80X53 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.86■□□□□ 0.93
Ccdc116Q80X53 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.86■□□□□ 0.93
Ccdc116Q80X53 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc116Q80X53 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Ccdc116Q80X53 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc116Q80X53 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc116Q80X53 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc116Q80X53 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.86■□□□□ 0.93
Ccdc116Q80X53 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc116Q80X53 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc116Q80X53 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc116Q80X53 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc116Q80X53 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc116Q80X53 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ccdc116Q80X53 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc116Q80X53 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ccdc116Q80X53 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc116Q80X53 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc116Q80X53 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc116Q80X53 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.85■□□□□ 0.93
Ccdc116Q80X53 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc116Q80X53 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ccdc116Q80X53 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc116Q80X53 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc116Q80X53 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ccdc116Q80X53 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc116Q80X53 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc116Q80X53 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Ccdc116Q80X53 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccdc116Q80X53 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ccdc116Q80X53 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.83■□□□□ 0.93
Ccdc116Q80X53 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.83■□□□□ 0.93
Ccdc116Q80X53 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.83■□□□□ 0.93
Ccdc116Q80X53 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccdc116Q80X53 Gm10420-201ENSMUST00000121713 882 ntBASIC20.82■□□□□ 0.92
Ccdc116Q80X53 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc116Q80X53 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc116Q80X53 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc116Q80X53 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc116Q80X53 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc116Q80X53 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccdc116Q80X53 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ccdc116Q80X53 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc116Q80X53 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc116Q80X53 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc116Q80X53 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ccdc116Q80X53 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc116Q80X53 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Ccdc116Q80X53 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccdc116Q80X53 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc116Q80X53 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ccdc116Q80X53 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc116Q80X53 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccdc116Q80X53 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.77■□□□□ 0.92
Ccdc116Q80X53 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Ccdc116Q80X53 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc116Q80X53 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ccdc116Q80X53 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc116Q80X53 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc116Q80X53 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ccdc116Q80X53 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccdc116Q80X53 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ccdc116Q80X53 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms