Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.87■■□□□ 1.09
Tnrc18Q80WC3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tnrc18Q80WC3 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tnrc18Q80WC3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Tnrc18Q80WC3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.86■■□□□ 1.09
Tnrc18Q80WC3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Tnrc18Q80WC3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Tnrc18Q80WC3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tnrc18Q80WC3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tnrc18Q80WC3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tnrc18Q80WC3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tnrc18Q80WC3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tnrc18Q80WC3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnrc18Q80WC3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnrc18Q80WC3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnrc18Q80WC3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnrc18Q80WC3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnrc18Q80WC3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tnrc18Q80WC3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Tnrc18Q80WC3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tnrc18Q80WC3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tnrc18Q80WC3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tnrc18Q80WC3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Tnrc18Q80WC3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tnrc18Q80WC3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tnrc18Q80WC3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tnrc18Q80WC3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.83■■□□□ 1.09
Tnrc18Q80WC3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.83■■□□□ 1.09
Tnrc18Q80WC3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Tnrc18Q80WC3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Tnrc18Q80WC3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Tnrc18Q80WC3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnrc18Q80WC3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnrc18Q80WC3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnrc18Q80WC3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnrc18Q80WC3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnrc18Q80WC3 Gm10849-201ENSMUST00000100397 618 ntBASIC21.82■■□□□ 1.08
Tnrc18Q80WC3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tnrc18Q80WC3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Tnrc18Q80WC3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Tnrc18Q80WC3 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.81■■□□□ 1.08
Tnrc18Q80WC3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.81■■□□□ 1.08
Tnrc18Q80WC3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Tnrc18Q80WC3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.8■■□□□ 1.08
Tnrc18Q80WC3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Tnrc18Q80WC3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnrc18Q80WC3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.79■■□□□ 1.08
Tnrc18Q80WC3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tnrc18Q80WC3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tnrc18Q80WC3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tnrc18Q80WC3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tnrc18Q80WC3 Gm5874-201ENSMUST00000096101 508 ntBASIC21.78■■□□□ 1.08
Tnrc18Q80WC3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tnrc18Q80WC3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Tnrc18Q80WC3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.78■■□□□ 1.08
Tnrc18Q80WC3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tnrc18Q80WC3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tnrc18Q80WC3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Tnrc18Q80WC3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tnrc18Q80WC3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Tnrc18Q80WC3 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Tnrc18Q80WC3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.07
Tnrc18Q80WC3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Tnrc18Q80WC3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Tnrc18Q80WC3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
Tnrc18Q80WC3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Tnrc18Q80WC3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.76■■□□□ 1.07
Tnrc18Q80WC3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tnrc18Q80WC3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Tnrc18Q80WC3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tnrc18Q80WC3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tnrc18Q80WC3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tnrc18Q80WC3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tnrc18Q80WC3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnrc18Q80WC3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Tnrc18Q80WC3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnrc18Q80WC3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.75■■□□□ 1.07
Tnrc18Q80WC3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tnrc18Q80WC3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.75■■□□□ 1.07
Tnrc18Q80WC3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Tnrc18Q80WC3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tnrc18Q80WC3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tnrc18Q80WC3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Tnrc18Q80WC3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Tnrc18Q80WC3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tnrc18Q80WC3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Tnrc18Q80WC3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tnrc18Q80WC3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tnrc18Q80WC3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tnrc18Q80WC3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.73■■□□□ 1.07
Tnrc18Q80WC3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tnrc18Q80WC3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tnrc18Q80WC3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.73■■□□□ 1.07
Tnrc18Q80WC3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Tnrc18Q80WC3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Tnrc18Q80WC3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tnrc18Q80WC3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tnrc18Q80WC3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.72■■□□□ 1.07
Tnrc18Q80WC3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tnrc18Q80WC3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 157.3 ms