Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trim62Q80V85 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim62Q80V85 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim62Q80V85 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.13
Trim62Q80V85 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.14■■□□□ 1.13
Trim62Q80V85 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim62Q80V85 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trim62Q80V85 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trim62Q80V85 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trim62Q80V85 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim62Q80V85 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.13■■□□□ 1.13
Trim62Q80V85 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim62Q80V85 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim62Q80V85 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim62Q80V85 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim62Q80V85 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim62Q80V85 Gm15546-201ENSMUST00000122095 826 ntBASIC22.12■■□□□ 1.13
Trim62Q80V85 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.12■■□□□ 1.13
Trim62Q80V85 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.12■■□□□ 1.13
Trim62Q80V85 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Trim62Q80V85 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim62Q80V85 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
Trim62Q80V85 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim62Q80V85 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.11■■□□□ 1.13
Trim62Q80V85 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim62Q80V85 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Trim62Q80V85 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim62Q80V85 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim62Q80V85 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim62Q80V85 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim62Q80V85 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim62Q80V85 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim62Q80V85 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim62Q80V85 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.1■■□□□ 1.13
Trim62Q80V85 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Trim62Q80V85 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Trim62Q80V85 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.09■■□□□ 1.13
Trim62Q80V85 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim62Q80V85 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trim62Q80V85 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim62Q80V85 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim62Q80V85 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.09■■□□□ 1.13
Trim62Q80V85 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim62Q80V85 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim62Q80V85 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Trim62Q80V85 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Trim62Q80V85 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim62Q80V85 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Trim62Q80V85 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim62Q80V85 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Trim62Q80V85 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim62Q80V85 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim62Q80V85 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
Trim62Q80V85 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim62Q80V85 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim62Q80V85 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trim62Q80V85 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim62Q80V85 Gm15820-201ENSMUST00000201566 728 ntBASIC22.05■■□□□ 1.12
Trim62Q80V85 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.05■■□□□ 1.12
Trim62Q80V85 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim62Q80V85 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim62Q80V85 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim62Q80V85 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.04■■□□□ 1.12
Trim62Q80V85 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.04■■□□□ 1.12
Trim62Q80V85 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.04■■□□□ 1.12
Trim62Q80V85 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.04■■□□□ 1.12
Trim62Q80V85 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim62Q80V85 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim62Q80V85 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim62Q80V85 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim62Q80V85 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.03■■□□□ 1.12
Trim62Q80V85 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim62Q80V85 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim62Q80V85 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Trim62Q80V85 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.03■■□□□ 1.12
Trim62Q80V85 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim62Q80V85 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim62Q80V85 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim62Q80V85 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim62Q80V85 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
Trim62Q80V85 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim62Q80V85 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim62Q80V85 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Trim62Q80V85 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.02■■□□□ 1.11
Trim62Q80V85 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Trim62Q80V85 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim62Q80V85 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.01■■□□□ 1.11
Trim62Q80V85 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim62Q80V85 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim62Q80V85 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Trim62Q80V85 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim62Q80V85 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim62Q80V85 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
Trim62Q80V85 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22■■□□□ 1.11
Trim62Q80V85 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22■■□□□ 1.11
Trim62Q80V85 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim62Q80V85 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Trim62Q80V85 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22■■□□□ 1.11
Trim62Q80V85 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim62Q80V85 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms