Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC33.82■■■■□ 3
Rpap1Q80TE0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
Rpap1Q80TE0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC33.82■■■■□ 3
Rpap1Q80TE0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC33.81■■■■□ 3
Rpap1Q80TE0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC33.81■■■■□ 3
Rpap1Q80TE0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC33.81■■■■□ 3
Rpap1Q80TE0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC33.81■■■■□ 3
Rpap1Q80TE0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC33.81■■■■□ 3
Rpap1Q80TE0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Rpap1Q80TE0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC33.8■■■■□ 3
Rpap1Q80TE0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC33.8■■■■□ 3
Rpap1Q80TE0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Rpap1Q80TE0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC33.79■■■■□ 3
Rpap1Q80TE0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC33.79■■■■□ 3
Rpap1Q80TE0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Rpap1Q80TE0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC33.79■■■■□ 3
Rpap1Q80TE0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Rpap1Q80TE0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC33.79■■■■□ 3
Rpap1Q80TE0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
Rpap1Q80TE0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC33.79■■■■□ 3
Rpap1Q80TE0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC33.78■■■■□ 3
Rpap1Q80TE0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Rpap1Q80TE0 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC33.78■■■■□ 3
Rpap1Q80TE0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC33.78■■■■□ 3
Rpap1Q80TE0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC33.78■■■■□ 3
Rpap1Q80TE0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC33.78■■■■□ 3
Rpap1Q80TE0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC33.77■■■■□ 3
Rpap1Q80TE0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC33.76■■■■□ 3
Rpap1Q80TE0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC33.76■■■□□ 2.99
Rpap1Q80TE0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■□□ 2.99
Rpap1Q80TE0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC33.75■■■□□ 2.99
Rpap1Q80TE0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Rpap1Q80TE0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Rpap1Q80TE0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC33.74■■■□□ 2.99
Rpap1Q80TE0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Rpap1Q80TE0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC33.74■■■□□ 2.99
Rpap1Q80TE0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Rpap1Q80TE0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
Rpap1Q80TE0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Rpap1Q80TE0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC33.74■■■□□ 2.99
Rpap1Q80TE0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Rpap1Q80TE0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC33.73■■■□□ 2.99
Rpap1Q80TE0 Gm6934-201ENSMUST00000194780 1905 ntBASIC33.73■■■□□ 2.99
Rpap1Q80TE0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Rpap1Q80TE0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Rpap1Q80TE0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC33.73■■■□□ 2.99
Rpap1Q80TE0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Rpap1Q80TE0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC33.72■■■□□ 2.99
Rpap1Q80TE0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
Rpap1Q80TE0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Rpap1Q80TE0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Rpap1Q80TE0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Rpap1Q80TE0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Rpap1Q80TE0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
Rpap1Q80TE0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC33.7■■■□□ 2.98
Rpap1Q80TE0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC33.7■■■□□ 2.98
Rpap1Q80TE0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC33.7■■■□□ 2.98
Rpap1Q80TE0 Gm8495-201ENSMUST00000188740 694 ntBASIC33.7■■■□□ 2.98
Rpap1Q80TE0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC33.7■■■□□ 2.98
Rpap1Q80TE0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC33.69■■■□□ 2.98
Rpap1Q80TE0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
Rpap1Q80TE0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC33.69■■■□□ 2.98
Rpap1Q80TE0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
Rpap1Q80TE0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC33.69■■■□□ 2.98
Rpap1Q80TE0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC33.69■■■□□ 2.98
Rpap1Q80TE0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC33.68■■■□□ 2.98
Rpap1Q80TE0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC33.68■■■□□ 2.98
Rpap1Q80TE0 Gm18284-201ENSMUST00000172604 624 ntBASIC33.68■■■□□ 2.98
Rpap1Q80TE0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
Rpap1Q80TE0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC33.68■■■□□ 2.98
Rpap1Q80TE0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC33.68■■■□□ 2.98
Rpap1Q80TE0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
Rpap1Q80TE0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC33.67■■■□□ 2.98
Rpap1Q80TE0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Rpap1Q80TE0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
Rpap1Q80TE0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Rpap1Q80TE0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC33.66■■■□□ 2.98
Rpap1Q80TE0 Gm2011-201ENSMUST00000203124 1263 ntBASIC33.66■■■□□ 2.98
Rpap1Q80TE0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Rpap1Q80TE0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
Rpap1Q80TE0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC33.65■■■□□ 2.98
Rpap1Q80TE0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
Rpap1Q80TE0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Rpap1Q80TE0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC33.64■■■□□ 2.98
Rpap1Q80TE0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC33.64■■■□□ 2.98
Rpap1Q80TE0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Rpap1Q80TE0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Rpap1Q80TE0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC33.63■■■□□ 2.97
Rpap1Q80TE0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC33.63■■■□□ 2.97
Rpap1Q80TE0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
Rpap1Q80TE0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
Rpap1Q80TE0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC33.63■■■□□ 2.97
Rpap1Q80TE0 Gm9207-201ENSMUST00000198773 1115 ntBASIC33.62■■■□□ 2.97
Rpap1Q80TE0 AC116713.1-201ENSMUST00000215074 430 ntBASIC33.62■■■□□ 2.97
Rpap1Q80TE0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC33.62■■■□□ 2.97
Rpap1Q80TE0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC33.62■■■□□ 2.97
Rpap1Q80TE0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
Rpap1Q80TE0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC33.62■■■□□ 2.97
Rpap1Q80TE0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
Rpap1Q80TE0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC33.61■■■□□ 2.97
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms