Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
ShprhQ7TPQ3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ShprhQ7TPQ3 Gm12821-201ENSMUST00000120022 600 ntBASIC31.13■■■□□ 2.57
ShprhQ7TPQ3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
ShprhQ7TPQ3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
ShprhQ7TPQ3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ShprhQ7TPQ3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ShprhQ7TPQ3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ShprhQ7TPQ3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC31.12■■■□□ 2.57
ShprhQ7TPQ3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ShprhQ7TPQ3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
ShprhQ7TPQ3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
ShprhQ7TPQ3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
ShprhQ7TPQ3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
ShprhQ7TPQ3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
ShprhQ7TPQ3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
ShprhQ7TPQ3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC31.1■■■□□ 2.57
ShprhQ7TPQ3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC31.1■■■□□ 2.57
ShprhQ7TPQ3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC31.1■■■□□ 2.57
ShprhQ7TPQ3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
ShprhQ7TPQ3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
ShprhQ7TPQ3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
ShprhQ7TPQ3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ShprhQ7TPQ3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC31.09■■■□□ 2.57
ShprhQ7TPQ3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC31.09■■■□□ 2.57
ShprhQ7TPQ3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ShprhQ7TPQ3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
ShprhQ7TPQ3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ShprhQ7TPQ3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ShprhQ7TPQ3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
ShprhQ7TPQ3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC31.09■■■□□ 2.57
ShprhQ7TPQ3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ShprhQ7TPQ3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
ShprhQ7TPQ3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
ShprhQ7TPQ3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
ShprhQ7TPQ3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC31.07■■■□□ 2.56
ShprhQ7TPQ3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
ShprhQ7TPQ3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
ShprhQ7TPQ3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
ShprhQ7TPQ3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
ShprhQ7TPQ3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC31.06■■■□□ 2.56
ShprhQ7TPQ3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
ShprhQ7TPQ3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC31.06■■■□□ 2.56
ShprhQ7TPQ3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
ShprhQ7TPQ3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC31.06■■■□□ 2.56
ShprhQ7TPQ3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ShprhQ7TPQ3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ShprhQ7TPQ3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC31.05■■■□□ 2.56
ShprhQ7TPQ3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
ShprhQ7TPQ3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
ShprhQ7TPQ3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
ShprhQ7TPQ3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
ShprhQ7TPQ3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
ShprhQ7TPQ3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
ShprhQ7TPQ3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
ShprhQ7TPQ3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
ShprhQ7TPQ3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
ShprhQ7TPQ3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
ShprhQ7TPQ3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
ShprhQ7TPQ3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
ShprhQ7TPQ3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC31■■■□□ 2.55
ShprhQ7TPQ3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ShprhQ7TPQ3 Gm5297-201ENSMUST00000198555 1171 ntBASIC31■■■□□ 2.55
ShprhQ7TPQ3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC31■■■□□ 2.55
ShprhQ7TPQ3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ShprhQ7TPQ3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC31■■■□□ 2.55
ShprhQ7TPQ3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
ShprhQ7TPQ3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
ShprhQ7TPQ3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
ShprhQ7TPQ3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
ShprhQ7TPQ3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ShprhQ7TPQ3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
ShprhQ7TPQ3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
ShprhQ7TPQ3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ShprhQ7TPQ3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
ShprhQ7TPQ3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ShprhQ7TPQ3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
ShprhQ7TPQ3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
ShprhQ7TPQ3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
ShprhQ7TPQ3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
ShprhQ7TPQ3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC30.96■■■□□ 2.55
ShprhQ7TPQ3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
ShprhQ7TPQ3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
ShprhQ7TPQ3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
ShprhQ7TPQ3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
ShprhQ7TPQ3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC30.95■■■□□ 2.55
ShprhQ7TPQ3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
ShprhQ7TPQ3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
ShprhQ7TPQ3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
ShprhQ7TPQ3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC30.94■■■□□ 2.54
ShprhQ7TPQ3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
ShprhQ7TPQ3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
ShprhQ7TPQ3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
ShprhQ7TPQ3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
ShprhQ7TPQ3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC30.92■■■□□ 2.54
ShprhQ7TPQ3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
ShprhQ7TPQ3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
ShprhQ7TPQ3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC30.91■■■□□ 2.54
ShprhQ7TPQ3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC30.91■■■□□ 2.54
ShprhQ7TPQ3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC30.91■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms