Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubfd1Q78JW9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ubfd1Q78JW9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.84■□□□□ 0.93
Ubfd1Q78JW9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubfd1Q78JW9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubfd1Q78JW9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubfd1Q78JW9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.83■□□□□ 0.93
Ubfd1Q78JW9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubfd1Q78JW9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ubfd1Q78JW9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ubfd1Q78JW9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ubfd1Q78JW9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubfd1Q78JW9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Ubfd1Q78JW9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.82■□□□□ 0.92
Ubfd1Q78JW9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubfd1Q78JW9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubfd1Q78JW9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubfd1Q78JW9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubfd1Q78JW9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ubfd1Q78JW9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubfd1Q78JW9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.81■□□□□ 0.92
Ubfd1Q78JW9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.81■□□□□ 0.92
Ubfd1Q78JW9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.81■□□□□ 0.92
Ubfd1Q78JW9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ubfd1Q78JW9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubfd1Q78JW9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ubfd1Q78JW9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubfd1Q78JW9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ubfd1Q78JW9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ubfd1Q78JW9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.8■□□□□ 0.92
Ubfd1Q78JW9 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.8■□□□□ 0.92
Ubfd1Q78JW9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubfd1Q78JW9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.8■□□□□ 0.92
Ubfd1Q78JW9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ubfd1Q78JW9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.79■□□□□ 0.92
Ubfd1Q78JW9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ubfd1Q78JW9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ubfd1Q78JW9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ubfd1Q78JW9 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.78■□□□□ 0.92
Ubfd1Q78JW9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ubfd1Q78JW9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.78■□□□□ 0.92
Ubfd1Q78JW9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.78■□□□□ 0.92
Ubfd1Q78JW9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ubfd1Q78JW9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ubfd1Q78JW9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.78■□□□□ 0.92
Ubfd1Q78JW9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ubfd1Q78JW9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubfd1Q78JW9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubfd1Q78JW9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubfd1Q78JW9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubfd1Q78JW9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubfd1Q78JW9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubfd1Q78JW9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubfd1Q78JW9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.77■□□□□ 0.92
Ubfd1Q78JW9 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.77■□□□□ 0.92
Ubfd1Q78JW9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubfd1Q78JW9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubfd1Q78JW9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ubfd1Q78JW9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ubfd1Q78JW9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ubfd1Q78JW9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubfd1Q78JW9 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubfd1Q78JW9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubfd1Q78JW9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Ubfd1Q78JW9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubfd1Q78JW9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubfd1Q78JW9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ubfd1Q78JW9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubfd1Q78JW9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Ubfd1Q78JW9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ubfd1Q78JW9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ubfd1Q78JW9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.74■□□□□ 0.91
Ubfd1Q78JW9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubfd1Q78JW9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubfd1Q78JW9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ubfd1Q78JW9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ubfd1Q78JW9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ubfd1Q78JW9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubfd1Q78JW9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.73■□□□□ 0.91
Ubfd1Q78JW9 Gm22238-201ENSMUST00000175222 88 ntBASIC20.73■□□□□ 0.91
Ubfd1Q78JW9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubfd1Q78JW9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ubfd1Q78JW9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubfd1Q78JW9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ubfd1Q78JW9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubfd1Q78JW9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ubfd1Q78JW9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubfd1Q78JW9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubfd1Q78JW9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubfd1Q78JW9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ubfd1Q78JW9 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.72■□□□□ 0.91
Ubfd1Q78JW9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ubfd1Q78JW9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubfd1Q78JW9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ubfd1Q78JW9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ubfd1Q78JW9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ubfd1Q78JW9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Ubfd1Q78JW9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ubfd1Q78JW9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ubfd1Q78JW9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 1181.2 ms