Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cachd1Q6PDJ1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cachd1Q6PDJ1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cachd1Q6PDJ1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cachd1Q6PDJ1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cachd1Q6PDJ1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cachd1Q6PDJ1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Cachd1Q6PDJ1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cachd1Q6PDJ1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cachd1Q6PDJ1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cachd1Q6PDJ1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cachd1Q6PDJ1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cachd1Q6PDJ1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.67■■□□□ 1.06
Cachd1Q6PDJ1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cachd1Q6PDJ1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cachd1Q6PDJ1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Cachd1Q6PDJ1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.66■■□□□ 1.06
Cachd1Q6PDJ1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.66■■□□□ 1.06
Cachd1Q6PDJ1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Cachd1Q6PDJ1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.66■■□□□ 1.06
Cachd1Q6PDJ1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
Cachd1Q6PDJ1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cachd1Q6PDJ1 Nespas-201ENSMUST00000143738 1083 ntBASIC21.65■■□□□ 1.06
Cachd1Q6PDJ1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cachd1Q6PDJ1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Cachd1Q6PDJ1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.64■■□□□ 1.06
Cachd1Q6PDJ1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cachd1Q6PDJ1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cachd1Q6PDJ1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cachd1Q6PDJ1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.64■■□□□ 1.05
Cachd1Q6PDJ1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cachd1Q6PDJ1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cachd1Q6PDJ1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cachd1Q6PDJ1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Gm10602-201ENSMUST00000098239 609 ntBASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cachd1Q6PDJ1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Gm8493-201ENSMUST00000196881 489 ntBASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Gm10252-201ENSMUST00000209541 832 ntBASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cachd1Q6PDJ1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Cachd1Q6PDJ1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cachd1Q6PDJ1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cachd1Q6PDJ1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cachd1Q6PDJ1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cachd1Q6PDJ1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cachd1Q6PDJ1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cachd1Q6PDJ1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cachd1Q6PDJ1 Gm43137-201ENSMUST00000198052 594 ntBASIC21.6■■□□□ 1.05
Cachd1Q6PDJ1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cachd1Q6PDJ1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cachd1Q6PDJ1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cachd1Q6PDJ1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cachd1Q6PDJ1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cachd1Q6PDJ1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Cachd1Q6PDJ1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cachd1Q6PDJ1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cachd1Q6PDJ1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cachd1Q6PDJ1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cachd1Q6PDJ1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cachd1Q6PDJ1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cachd1Q6PDJ1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cachd1Q6PDJ1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cachd1Q6PDJ1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cachd1Q6PDJ1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.58■■□□□ 1.05
Cachd1Q6PDJ1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Cachd1Q6PDJ1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cachd1Q6PDJ1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cachd1Q6PDJ1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cachd1Q6PDJ1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cachd1Q6PDJ1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Cachd1Q6PDJ1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.56■■□□□ 1.04
Cachd1Q6PDJ1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cachd1Q6PDJ1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cachd1Q6PDJ1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.56■■□□□ 1.04
Cachd1Q6PDJ1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.56■■□□□ 1.04
Cachd1Q6PDJ1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cachd1Q6PDJ1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cachd1Q6PDJ1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cachd1Q6PDJ1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Cachd1Q6PDJ1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Cachd1Q6PDJ1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.55■■□□□ 1.04
Cachd1Q6PDJ1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cachd1Q6PDJ1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.54■■□□□ 1.04
Cachd1Q6PDJ1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cachd1Q6PDJ1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cachd1Q6PDJ1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cachd1Q6PDJ1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 177.9 ms