Protein–RNA interactions for Protein: Q6P7W5

Tsen2, tRNA-splicing endonuclease subunit Sen2, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen2Q6P7W5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Tsen2Q6P7W5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Tsen2Q6P7W5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC28.2■■■□□ 2.1
Tsen2Q6P7W5 Rps24-207ENSMUST00000224568 714 ntBASIC28.2■■■□□ 2.1
Tsen2Q6P7W5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Tsen2Q6P7W5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Tsen2Q6P7W5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Tsen2Q6P7W5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Tsen2Q6P7W5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tsen2Q6P7W5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC28.19■■■□□ 2.1
Tsen2Q6P7W5 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tsen2Q6P7W5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Tsen2Q6P7W5 Gm45102-201ENSMUST00000207427 857 ntBASIC28.18■■■□□ 2.1
Tsen2Q6P7W5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC28.18■■■□□ 2.1
Tsen2Q6P7W5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Tsen2Q6P7W5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
Tsen2Q6P7W5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC28.17■■■□□ 2.1
Tsen2Q6P7W5 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Tsen2Q6P7W5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Tsen2Q6P7W5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
Tsen2Q6P7W5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Tsen2Q6P7W5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Tsen2Q6P7W5 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Tsen2Q6P7W5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC28.16■■■□□ 2.1
Tsen2Q6P7W5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Tsen2Q6P7W5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Tsen2Q6P7W5 Gm14117-201ENSMUST00000122417 843 ntBASIC28.15■■■□□ 2.1
Tsen2Q6P7W5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC28.15■■■□□ 2.1
Tsen2Q6P7W5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Tsen2Q6P7W5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC28.14■■■□□ 2.1
Tsen2Q6P7W5 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC28.14■■■□□ 2.1
Tsen2Q6P7W5 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC28.14■■■□□ 2.1
Tsen2Q6P7W5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC28.14■■■□□ 2.1
Tsen2Q6P7W5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Tsen2Q6P7W5 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Tsen2Q6P7W5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Tsen2Q6P7W5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Tsen2Q6P7W5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Tsen2Q6P7W5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Tsen2Q6P7W5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Tsen2Q6P7W5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Tsen2Q6P7W5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Tsen2Q6P7W5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Tsen2Q6P7W5 Gm5131-201ENSMUST00000212776 1238 ntBASIC28.12■■■□□ 2.09
Tsen2Q6P7W5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Tsen2Q6P7W5 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Tsen2Q6P7W5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Tsen2Q6P7W5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Tsen2Q6P7W5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
Tsen2Q6P7W5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Tsen2Q6P7W5 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Tsen2Q6P7W5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC28.1■■■□□ 2.09
Tsen2Q6P7W5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
Tsen2Q6P7W5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Tsen2Q6P7W5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tsen2Q6P7W5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tsen2Q6P7W5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC28.09■■■□□ 2.09
Tsen2Q6P7W5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC28.09■■■□□ 2.09
Tsen2Q6P7W5 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
Tsen2Q6P7W5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tsen2Q6P7W5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC28.09■■■□□ 2.09
Tsen2Q6P7W5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tsen2Q6P7W5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tsen2Q6P7W5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tsen2Q6P7W5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tsen2Q6P7W5 Etf1-202ENSMUST00000180351 108 ntBASIC28.08■■■□□ 2.09
Tsen2Q6P7W5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC28.08■■■□□ 2.09
Tsen2Q6P7W5 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tsen2Q6P7W5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC28.08■■■□□ 2.09
Tsen2Q6P7W5 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tsen2Q6P7W5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tsen2Q6P7W5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tsen2Q6P7W5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Tsen2Q6P7W5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Tsen2Q6P7W5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Tsen2Q6P7W5 AC158990.1-201ENSMUST00000221450 2016 ntBASIC28.07■■■□□ 2.08
Tsen2Q6P7W5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Tsen2Q6P7W5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
Tsen2Q6P7W5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Tsen2Q6P7W5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC28.05■■■□□ 2.08
Tsen2Q6P7W5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Tsen2Q6P7W5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Tsen2Q6P7W5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
Tsen2Q6P7W5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
Tsen2Q6P7W5 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC28.04■■■□□ 2.08
Tsen2Q6P7W5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC28.03■■■□□ 2.08
Tsen2Q6P7W5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Tsen2Q6P7W5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC28.03■■■□□ 2.08
Tsen2Q6P7W5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Tsen2Q6P7W5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Tsen2Q6P7W5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Tsen2Q6P7W5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Tsen2Q6P7W5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Tsen2Q6P7W5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Tsen2Q6P7W5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC28.02■■■□□ 2.08
Tsen2Q6P7W5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Tsen2Q6P7W5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Tsen2Q6P7W5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
Tsen2Q6P7W5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Tsen2Q6P7W5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms