Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.65■□□□□ 0.9
Cpsf6Q6NVF9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cpsf6Q6NVF9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf6Q6NVF9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.64■□□□□ 0.89
Cpsf6Q6NVF9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cpsf6Q6NVF9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cpsf6Q6NVF9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf6Q6NVF9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf6Q6NVF9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.63■□□□□ 0.89
Cpsf6Q6NVF9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf6Q6NVF9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf6Q6NVF9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.63■□□□□ 0.89
Cpsf6Q6NVF9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf6Q6NVF9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf6Q6NVF9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cpsf6Q6NVF9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf6Q6NVF9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf6Q6NVF9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.62■□□□□ 0.89
Cpsf6Q6NVF9 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.62■□□□□ 0.89
Cpsf6Q6NVF9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.62■□□□□ 0.89
Cpsf6Q6NVF9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf6Q6NVF9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf6Q6NVF9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cpsf6Q6NVF9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf6Q6NVF9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf6Q6NVF9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf6Q6NVF9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.61■□□□□ 0.89
Cpsf6Q6NVF9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf6Q6NVF9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.61■□□□□ 0.89
Cpsf6Q6NVF9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf6Q6NVF9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cpsf6Q6NVF9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.6■□□□□ 0.89
Cpsf6Q6NVF9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Cpsf6Q6NVF9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf6Q6NVF9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf6Q6NVF9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.6■□□□□ 0.89
Cpsf6Q6NVF9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cpsf6Q6NVF9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf6Q6NVF9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cpsf6Q6NVF9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.59■□□□□ 0.89
Cpsf6Q6NVF9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.59■□□□□ 0.89
Cpsf6Q6NVF9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf6Q6NVF9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf6Q6NVF9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cpsf6Q6NVF9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpsf6Q6NVF9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpsf6Q6NVF9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cpsf6Q6NVF9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf6Q6NVF9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.57■□□□□ 0.88
Cpsf6Q6NVF9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.57■□□□□ 0.88
Cpsf6Q6NVF9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Cpsf6Q6NVF9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cpsf6Q6NVF9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cpsf6Q6NVF9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf6Q6NVF9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf6Q6NVF9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.56■□□□□ 0.88
Cpsf6Q6NVF9 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.56■□□□□ 0.88
Cpsf6Q6NVF9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf6Q6NVF9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cpsf6Q6NVF9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.56■□□□□ 0.88
Cpsf6Q6NVF9 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.55■□□□□ 0.88
Cpsf6Q6NVF9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cpsf6Q6NVF9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf6Q6NVF9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf6Q6NVF9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf6Q6NVF9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cpsf6Q6NVF9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cpsf6Q6NVF9 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.54■□□□□ 0.88
Cpsf6Q6NVF9 Gm10420-201ENSMUST00000121713 882 ntBASIC20.54■□□□□ 0.88
Cpsf6Q6NVF9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cpsf6Q6NVF9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf6Q6NVF9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf6Q6NVF9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.53■□□□□ 0.88
Cpsf6Q6NVF9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf6Q6NVF9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.53■□□□□ 0.88
Cpsf6Q6NVF9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf6Q6NVF9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf6Q6NVF9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.53■□□□□ 0.88
Cpsf6Q6NVF9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Cpsf6Q6NVF9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf6Q6NVF9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Cpsf6Q6NVF9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cpsf6Q6NVF9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf6Q6NVF9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf6Q6NVF9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.52■□□□□ 0.88
Cpsf6Q6NVF9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf6Q6NVF9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf6Q6NVF9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Cpsf6Q6NVF9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cpsf6Q6NVF9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf6Q6NVF9 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.51■□□□□ 0.87
Cpsf6Q6NVF9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf6Q6NVF9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Cpsf6Q6NVF9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf6Q6NVF9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.51■□□□□ 0.87
Cpsf6Q6NVF9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Cpsf6Q6NVF9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf6Q6NVF9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cpsf6Q6NVF9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cpsf6Q6NVF9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms