Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Sp140Q6NSQ5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sp140Q6NSQ5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sp140Q6NSQ5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sp140Q6NSQ5 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sp140Q6NSQ5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.65■■□□□ 1.06
Sp140Q6NSQ5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sp140Q6NSQ5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sp140Q6NSQ5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sp140Q6NSQ5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sp140Q6NSQ5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.64■■□□□ 1.06
Sp140Q6NSQ5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.64■■□□□ 1.06
Sp140Q6NSQ5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.64■■□□□ 1.05
Sp140Q6NSQ5 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.64■■□□□ 1.05
Sp140Q6NSQ5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sp140Q6NSQ5 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sp140Q6NSQ5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sp140Q6NSQ5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.63■■□□□ 1.05
Sp140Q6NSQ5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sp140Q6NSQ5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sp140Q6NSQ5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sp140Q6NSQ5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Sp140Q6NSQ5 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
Sp140Q6NSQ5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Sp140Q6NSQ5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sp140Q6NSQ5 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.62■■□□□ 1.05
Sp140Q6NSQ5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sp140Q6NSQ5 Gm10420-201ENSMUST00000121713 882 ntBASIC21.62■■□□□ 1.05
Sp140Q6NSQ5 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.62■■□□□ 1.05
Sp140Q6NSQ5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sp140Q6NSQ5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sp140Q6NSQ5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sp140Q6NSQ5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
Sp140Q6NSQ5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Sp140Q6NSQ5 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.61■■□□□ 1.05
Sp140Q6NSQ5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sp140Q6NSQ5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Sp140Q6NSQ5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sp140Q6NSQ5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sp140Q6NSQ5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sp140Q6NSQ5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Sp140Q6NSQ5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sp140Q6NSQ5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sp140Q6NSQ5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.59■■□□□ 1.05
Sp140Q6NSQ5 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sp140Q6NSQ5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sp140Q6NSQ5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sp140Q6NSQ5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sp140Q6NSQ5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.59■■□□□ 1.05
Sp140Q6NSQ5 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Sp140Q6NSQ5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sp140Q6NSQ5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sp140Q6NSQ5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
Sp140Q6NSQ5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sp140Q6NSQ5 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sp140Q6NSQ5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Sp140Q6NSQ5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sp140Q6NSQ5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Sp140Q6NSQ5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sp140Q6NSQ5 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sp140Q6NSQ5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sp140Q6NSQ5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sp140Q6NSQ5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sp140Q6NSQ5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Sp140Q6NSQ5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sp140Q6NSQ5 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.55■■□□□ 1.04
Sp140Q6NSQ5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.55■■□□□ 1.04
Sp140Q6NSQ5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sp140Q6NSQ5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sp140Q6NSQ5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sp140Q6NSQ5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sp140Q6NSQ5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sp140Q6NSQ5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sp140Q6NSQ5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.54■■□□□ 1.04
Sp140Q6NSQ5 Cap2-205ENSMUST00000225824 1634 ntBASIC21.53■■□□□ 1.04
Sp140Q6NSQ5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sp140Q6NSQ5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sp140Q6NSQ5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Sp140Q6NSQ5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sp140Q6NSQ5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sp140Q6NSQ5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.52■■□□□ 1.04
Sp140Q6NSQ5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sp140Q6NSQ5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sp140Q6NSQ5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.51■■□□□ 1.03
Sp140Q6NSQ5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sp140Q6NSQ5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
Sp140Q6NSQ5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Sp140Q6NSQ5 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sp140Q6NSQ5 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sp140Q6NSQ5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sp140Q6NSQ5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Sp140Q6NSQ5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sp140Q6NSQ5 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sp140Q6NSQ5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sp140Q6NSQ5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Sp140Q6NSQ5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Sp140Q6NSQ5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Sp140Q6NSQ5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sp140Q6NSQ5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sp140Q6NSQ5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 135.4 ms