Protein–RNA interactions for Protein: Q684R7

Frem1, FRAS1-related extracellular matrix protein 1, mousemouse

Predictions only

Length 2,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem1Q684R7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frem1Q684R7 Gm40881-201ENSMUST00000223397 166 ntBASIC18.66■□□□□ 0.58
Frem1Q684R7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frem1Q684R7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frem1Q684R7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frem1Q684R7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frem1Q684R7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frem1Q684R7 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.66■□□□□ 0.58
Frem1Q684R7 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frem1Q684R7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Frem1Q684R7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Frem1Q684R7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Frem1Q684R7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.65■□□□□ 0.58
Frem1Q684R7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Frem1Q684R7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Frem1Q684R7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Frem1Q684R7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Frem1Q684R7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Frem1Q684R7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Frem1Q684R7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Frem1Q684R7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Frem1Q684R7 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Frem1Q684R7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Frem1Q684R7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Frem1Q684R7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Frem1Q684R7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Frem1Q684R7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Frem1Q684R7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Frem1Q684R7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Frem1Q684R7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.63■□□□□ 0.57
Frem1Q684R7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Frem1Q684R7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.63■□□□□ 0.57
Frem1Q684R7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Frem1Q684R7 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.62■□□□□ 0.57
Frem1Q684R7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Frem1Q684R7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Frem1Q684R7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Frem1Q684R7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Frem1Q684R7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Frem1Q684R7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Frem1Q684R7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.61■□□□□ 0.57
Frem1Q684R7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Frem1Q684R7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.61■□□□□ 0.57
Frem1Q684R7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Frem1Q684R7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Frem1Q684R7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Frem1Q684R7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Frem1Q684R7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Frem1Q684R7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Frem1Q684R7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Frem1Q684R7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Frem1Q684R7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Frem1Q684R7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Frem1Q684R7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Frem1Q684R7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Frem1Q684R7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Frem1Q684R7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Frem1Q684R7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Frem1Q684R7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Frem1Q684R7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Frem1Q684R7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Frem1Q684R7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Frem1Q684R7 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Frem1Q684R7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Frem1Q684R7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Frem1Q684R7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.58■□□□□ 0.57
Frem1Q684R7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Frem1Q684R7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.58■□□□□ 0.56
Frem1Q684R7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.58■□□□□ 0.56
Frem1Q684R7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.58■□□□□ 0.56
Frem1Q684R7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Frem1Q684R7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Frem1Q684R7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Frem1Q684R7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Frem1Q684R7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Frem1Q684R7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Frem1Q684R7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Frem1Q684R7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
Frem1Q684R7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Frem1Q684R7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frem1Q684R7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Frem1Q684R7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frem1Q684R7 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frem1Q684R7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frem1Q684R7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frem1Q684R7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frem1Q684R7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.56■□□□□ 0.56
Frem1Q684R7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.56■□□□□ 0.56
Frem1Q684R7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Frem1Q684R7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frem1Q684R7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frem1Q684R7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frem1Q684R7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frem1Q684R7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frem1Q684R7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frem1Q684R7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Frem1Q684R7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Frem1Q684R7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Frem1Q684R7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Frem1Q684R7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms