Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scube3Q66PY1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scube3Q66PY1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scube3Q66PY1 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.43■■□□□ 1.18
Scube3Q66PY1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.43■■□□□ 1.18
Scube3Q66PY1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Scube3Q66PY1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Scube3Q66PY1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
Scube3Q66PY1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Scube3Q66PY1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Scube3Q66PY1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Scube3Q66PY1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Scube3Q66PY1 Gm15820-201ENSMUST00000201566 728 ntBASIC22.42■■□□□ 1.18
Scube3Q66PY1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Scube3Q66PY1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.42■■□□□ 1.18
Scube3Q66PY1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Scube3Q66PY1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Scube3Q66PY1 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.41■■□□□ 1.18
Scube3Q66PY1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
Scube3Q66PY1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Scube3Q66PY1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Scube3Q66PY1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Scube3Q66PY1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Scube3Q66PY1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Scube3Q66PY1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Scube3Q66PY1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.4■■□□□ 1.18
Scube3Q66PY1 Gm10232-201ENSMUST00000089221 720 ntBASIC22.4■■□□□ 1.18
Scube3Q66PY1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Scube3Q66PY1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Scube3Q66PY1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Scube3Q66PY1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Scube3Q66PY1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Scube3Q66PY1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Scube3Q66PY1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Scube3Q66PY1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Scube3Q66PY1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Scube3Q66PY1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Scube3Q66PY1 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.37■■□□□ 1.17
Scube3Q66PY1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.37■■□□□ 1.17
Scube3Q66PY1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Scube3Q66PY1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Scube3Q66PY1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Scube3Q66PY1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Scube3Q66PY1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scube3Q66PY1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Scube3Q66PY1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.36■■□□□ 1.17
Scube3Q66PY1 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.36■■□□□ 1.17
Scube3Q66PY1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scube3Q66PY1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Scube3Q66PY1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Scube3Q66PY1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Scube3Q66PY1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Scube3Q66PY1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Scube3Q66PY1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scube3Q66PY1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scube3Q66PY1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.35■■□□□ 1.17
Scube3Q66PY1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Scube3Q66PY1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.35■■□□□ 1.17
Scube3Q66PY1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.35■■□□□ 1.17
Scube3Q66PY1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scube3Q66PY1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Scube3Q66PY1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.34■■□□□ 1.17
Scube3Q66PY1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scube3Q66PY1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Scube3Q66PY1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Scube3Q66PY1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scube3Q66PY1 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scube3Q66PY1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scube3Q66PY1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Scube3Q66PY1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Scube3Q66PY1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Scube3Q66PY1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.32■■□□□ 1.16
Scube3Q66PY1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Scube3Q66PY1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Scube3Q66PY1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC22.31■■□□□ 1.16
Scube3Q66PY1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Scube3Q66PY1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.31■■□□□ 1.16
Scube3Q66PY1 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.31■■□□□ 1.16
Scube3Q66PY1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Scube3Q66PY1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Scube3Q66PY1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Scube3Q66PY1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
Scube3Q66PY1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
Scube3Q66PY1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Scube3Q66PY1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Scube3Q66PY1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Scube3Q66PY1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Scube3Q66PY1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Scube3Q66PY1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC22.29■■□□□ 1.16
Scube3Q66PY1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.29■■□□□ 1.16
Scube3Q66PY1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Scube3Q66PY1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Scube3Q66PY1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Scube3Q66PY1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scube3Q66PY1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scube3Q66PY1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Scube3Q66PY1 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.28■■□□□ 1.16
Scube3Q66PY1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC22.28■■□□□ 1.16
Scube3Q66PY1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scube3Q66PY1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms