Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Col11a2Q64739 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Col11a2Q64739 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Col11a2Q64739 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC26.72■■□□□ 1.87
Col11a2Q64739 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col11a2Q64739 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Col11a2Q64739 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Col11a2Q64739 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Col11a2Q64739 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC26.7■■□□□ 1.86
Col11a2Q64739 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Col11a2Q64739 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Col11a2Q64739 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.69■■□□□ 1.86
Col11a2Q64739 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Col11a2Q64739 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC26.69■■□□□ 1.86
Col11a2Q64739 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC26.69■■□□□ 1.86
Col11a2Q64739 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Col11a2Q64739 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC26.68■■□□□ 1.86
Col11a2Q64739 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Col11a2Q64739 Gm43017-201ENSMUST00000198296 752 ntBASIC26.68■■□□□ 1.86
Col11a2Q64739 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Col11a2Q64739 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Col11a2Q64739 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC26.67■■□□□ 1.86
Col11a2Q64739 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC26.67■■□□□ 1.86
Col11a2Q64739 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Col11a2Q64739 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Col11a2Q64739 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC26.66■■□□□ 1.86
Col11a2Q64739 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Col11a2Q64739 Gm6139-201ENSMUST00000079261 882 ntBASIC26.66■■□□□ 1.86
Col11a2Q64739 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Col11a2Q64739 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
Col11a2Q64739 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Col11a2Q64739 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Col11a2Q64739 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Col11a2Q64739 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Col11a2Q64739 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Col11a2Q64739 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Col11a2Q64739 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Col11a2Q64739 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Col11a2Q64739 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col11a2Q64739 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
Col11a2Q64739 AC164629.5-201ENSMUST00000220387 632 ntBASIC26.63■■□□□ 1.85
Col11a2Q64739 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col11a2Q64739 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
Col11a2Q64739 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col11a2Q64739 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
Col11a2Q64739 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC26.62■■□□□ 1.85
Col11a2Q64739 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC26.62■■□□□ 1.85
Col11a2Q64739 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC26.62■■□□□ 1.85
Col11a2Q64739 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col11a2Q64739 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col11a2Q64739 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col11a2Q64739 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
Col11a2Q64739 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Col11a2Q64739 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Col11a2Q64739 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Col11a2Q64739 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
Col11a2Q64739 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC26.6■■□□□ 1.85
Col11a2Q64739 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col11a2Q64739 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col11a2Q64739 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col11a2Q64739 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col11a2Q64739 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col11a2Q64739 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
Col11a2Q64739 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
Col11a2Q64739 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col11a2Q64739 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col11a2Q64739 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col11a2Q64739 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.57■■□□□ 1.84
Col11a2Q64739 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Col11a2Q64739 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
Col11a2Q64739 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.57■■□□□ 1.84
Col11a2Q64739 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Col11a2Q64739 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col11a2Q64739 Gm9207-201ENSMUST00000198773 1115 ntBASIC26.56■■□□□ 1.84
Col11a2Q64739 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col11a2Q64739 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col11a2Q64739 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col11a2Q64739 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
Col11a2Q64739 Gm43137-201ENSMUST00000198052 594 ntBASIC26.56■■□□□ 1.84
Col11a2Q64739 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Col11a2Q64739 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC26.55■■□□□ 1.84
Col11a2Q64739 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC26.54■■□□□ 1.84
Col11a2Q64739 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
Col11a2Q64739 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col11a2Q64739 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col11a2Q64739 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
Col11a2Q64739 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col11a2Q64739 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col11a2Q64739 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Col11a2Q64739 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Col11a2Q64739 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Col11a2Q64739 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Col11a2Q64739 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Col11a2Q64739 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Col11a2Q64739 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC26.51■■□□□ 1.84
Col11a2Q64739 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Col11a2Q64739 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Col11a2Q64739 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Col11a2Q64739 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Col11a2Q64739 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms