Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Sdf4Q61112 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sdf4Q61112 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sdf4Q61112 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.61■■□□□ 1.05
Sdf4Q61112 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sdf4Q61112 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sdf4Q61112 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sdf4Q61112 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sdf4Q61112 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sdf4Q61112 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sdf4Q61112 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.6■■□□□ 1.05
Sdf4Q61112 Gm5921-201ENSMUST00000075898 882 ntBASIC21.6■■□□□ 1.05
Sdf4Q61112 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sdf4Q61112 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sdf4Q61112 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Sdf4Q61112 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
Sdf4Q61112 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sdf4Q61112 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.59■■□□□ 1.05
Sdf4Q61112 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sdf4Q61112 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sdf4Q61112 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sdf4Q61112 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sdf4Q61112 Gm45444-201ENSMUST00000211394 898 ntBASIC21.58■■□□□ 1.05
Sdf4Q61112 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Sdf4Q61112 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sdf4Q61112 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Sdf4Q61112 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.58■■□□□ 1.04
Sdf4Q61112 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sdf4Q61112 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sdf4Q61112 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sdf4Q61112 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.57■■□□□ 1.04
Sdf4Q61112 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sdf4Q61112 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sdf4Q61112 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.57■■□□□ 1.04
Sdf4Q61112 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sdf4Q61112 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sdf4Q61112 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sdf4Q61112 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sdf4Q61112 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sdf4Q61112 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sdf4Q61112 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.56■■□□□ 1.04
Sdf4Q61112 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Sdf4Q61112 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Sdf4Q61112 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sdf4Q61112 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sdf4Q61112 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.56■■□□□ 1.04
Sdf4Q61112 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Sdf4Q61112 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sdf4Q61112 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Sdf4Q61112 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Sdf4Q61112 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sdf4Q61112 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sdf4Q61112 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sdf4Q61112 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sdf4Q61112 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sdf4Q61112 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.54■■□□□ 1.04
Sdf4Q61112 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sdf4Q61112 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sdf4Q61112 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Sdf4Q61112 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.54■■□□□ 1.04
Sdf4Q61112 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sdf4Q61112 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sdf4Q61112 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sdf4Q61112 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sdf4Q61112 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sdf4Q61112 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Sdf4Q61112 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sdf4Q61112 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Sdf4Q61112 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sdf4Q61112 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sdf4Q61112 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Sdf4Q61112 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sdf4Q61112 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sdf4Q61112 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sdf4Q61112 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.52■■□□□ 1.04
Sdf4Q61112 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sdf4Q61112 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sdf4Q61112 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sdf4Q61112 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.52■■□□□ 1.03
Sdf4Q61112 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sdf4Q61112 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Sdf4Q61112 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Sdf4Q61112 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sdf4Q61112 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Sdf4Q61112 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sdf4Q61112 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sdf4Q61112 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.5■■□□□ 1.03
Sdf4Q61112 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sdf4Q61112 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sdf4Q61112 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Sdf4Q61112 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sdf4Q61112 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sdf4Q61112 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Sdf4Q61112 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.49■■□□□ 1.03
Sdf4Q61112 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sdf4Q61112 Gm43566-201ENSMUST00000196851 808 ntBASIC21.49■■□□□ 1.03
Sdf4Q61112 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sdf4Q61112 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sdf4Q61112 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.49■■□□□ 1.03
Sdf4Q61112 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms