Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sim2Q61079 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sim2Q61079 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Sim2Q61079 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sim2Q61079 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sim2Q61079 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sim2Q61079 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Sim2Q61079 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sim2Q61079 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sim2Q61079 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sim2Q61079 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.96■□□□□ 0.95
Sim2Q61079 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.96■□□□□ 0.95
Sim2Q61079 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Sim2Q61079 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Sim2Q61079 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.96■□□□□ 0.95
Sim2Q61079 Gm29257-201ENSMUST00000186115 639 ntBASIC20.96■□□□□ 0.95
Sim2Q61079 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sim2Q61079 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.96■□□□□ 0.95
Sim2Q61079 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Sim2Q61079 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sim2Q61079 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sim2Q61079 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sim2Q61079 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sim2Q61079 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sim2Q61079 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sim2Q61079 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Sim2Q61079 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sim2Q61079 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sim2Q61079 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sim2Q61079 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sim2Q61079 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.94■□□□□ 0.94
Sim2Q61079 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.94■□□□□ 0.94
Sim2Q61079 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.93■□□□□ 0.94
Sim2Q61079 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.93■□□□□ 0.94
Sim2Q61079 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Sim2Q61079 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sim2Q61079 Gm6139-201ENSMUST00000079261 882 ntBASIC20.93■□□□□ 0.94
Sim2Q61079 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sim2Q61079 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Sim2Q61079 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sim2Q61079 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.93■□□□□ 0.94
Sim2Q61079 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sim2Q61079 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sim2Q61079 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Sim2Q61079 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sim2Q61079 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Sim2Q61079 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sim2Q61079 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sim2Q61079 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Sim2Q61079 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sim2Q61079 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sim2Q61079 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sim2Q61079 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.91■□□□□ 0.94
Sim2Q61079 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Sim2Q61079 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.91■□□□□ 0.94
Sim2Q61079 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sim2Q61079 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sim2Q61079 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sim2Q61079 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sim2Q61079 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sim2Q61079 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.9■□□□□ 0.94
Sim2Q61079 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sim2Q61079 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sim2Q61079 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Sim2Q61079 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.89■□□□□ 0.93
Sim2Q61079 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sim2Q61079 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sim2Q61079 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Sim2Q61079 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sim2Q61079 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Sim2Q61079 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sim2Q61079 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sim2Q61079 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
Sim2Q61079 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.88■□□□□ 0.93
Sim2Q61079 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.88■□□□□ 0.93
Sim2Q61079 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sim2Q61079 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sim2Q61079 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sim2Q61079 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sim2Q61079 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.87■□□□□ 0.93
Sim2Q61079 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sim2Q61079 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sim2Q61079 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sim2Q61079 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.87■□□□□ 0.93
Sim2Q61079 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sim2Q61079 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sim2Q61079 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sim2Q61079 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sim2Q61079 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sim2Q61079 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sim2Q61079 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sim2Q61079 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.86■□□□□ 0.93
Sim2Q61079 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.86■□□□□ 0.93
Sim2Q61079 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Sim2Q61079 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sim2Q61079 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sim2Q61079 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Sim2Q61079 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sim2Q61079 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sim2Q61079 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms