Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Xrcc1Q60596 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.38■□□□□ 0.85
Xrcc1Q60596 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Xrcc1Q60596 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Xrcc1Q60596 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Xrcc1Q60596 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Xrcc1Q60596 Gm15546-201ENSMUST00000122095 826 ntBASIC20.37■□□□□ 0.85
Xrcc1Q60596 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Xrcc1Q60596 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.37■□□□□ 0.85
Xrcc1Q60596 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Xrcc1Q60596 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Xrcc1Q60596 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Xrcc1Q60596 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.36■□□□□ 0.85
Xrcc1Q60596 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Xrcc1Q60596 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Xrcc1Q60596 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Xrcc1Q60596 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Xrcc1Q60596 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Xrcc1Q60596 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Xrcc1Q60596 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Xrcc1Q60596 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Xrcc1Q60596 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.35■□□□□ 0.85
Xrcc1Q60596 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Xrcc1Q60596 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Xrcc1Q60596 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.35■□□□□ 0.85
Xrcc1Q60596 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Xrcc1Q60596 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Xrcc1Q60596 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Xrcc1Q60596 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Xrcc1Q60596 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.34■□□□□ 0.85
Xrcc1Q60596 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Xrcc1Q60596 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Xrcc1Q60596 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Xrcc1Q60596 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Xrcc1Q60596 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Xrcc1Q60596 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Xrcc1Q60596 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Xrcc1Q60596 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Xrcc1Q60596 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Xrcc1Q60596 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Xrcc1Q60596 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Xrcc1Q60596 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Xrcc1Q60596 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.32■□□□□ 0.84
Xrcc1Q60596 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Xrcc1Q60596 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Xrcc1Q60596 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Xrcc1Q60596 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Xrcc1Q60596 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Xrcc1Q60596 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Xrcc1Q60596 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Xrcc1Q60596 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Xrcc1Q60596 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Xrcc1Q60596 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.31■□□□□ 0.84
Xrcc1Q60596 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.31■□□□□ 0.84
Xrcc1Q60596 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.31■□□□□ 0.84
Xrcc1Q60596 Gm10232-201ENSMUST00000089221 720 ntBASIC20.31■□□□□ 0.84
Xrcc1Q60596 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Xrcc1Q60596 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Xrcc1Q60596 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.3■□□□□ 0.84
Xrcc1Q60596 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Xrcc1Q60596 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Xrcc1Q60596 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Xrcc1Q60596 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.3■□□□□ 0.84
Xrcc1Q60596 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Xrcc1Q60596 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Xrcc1Q60596 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Xrcc1Q60596 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Xrcc1Q60596 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Xrcc1Q60596 Gm15820-201ENSMUST00000201566 728 ntBASIC20.29■□□□□ 0.84
Xrcc1Q60596 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.29■□□□□ 0.84
Xrcc1Q60596 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Xrcc1Q60596 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Xrcc1Q60596 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Xrcc1Q60596 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Xrcc1Q60596 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Xrcc1Q60596 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Xrcc1Q60596 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Xrcc1Q60596 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Xrcc1Q60596 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Xrcc1Q60596 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Xrcc1Q60596 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Xrcc1Q60596 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Xrcc1Q60596 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Xrcc1Q60596 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Xrcc1Q60596 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Xrcc1Q60596 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.26■□□□□ 0.83
Xrcc1Q60596 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Xrcc1Q60596 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Xrcc1Q60596 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.26■□□□□ 0.83
Xrcc1Q60596 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Xrcc1Q60596 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Xrcc1Q60596 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Xrcc1Q60596 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Xrcc1Q60596 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Xrcc1Q60596 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Xrcc1Q60596 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Xrcc1Q60596 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Xrcc1Q60596 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Xrcc1Q60596 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Xrcc1Q60596 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms